Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM2Q9C040 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM2Q9C040 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM2Q9C040 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
TRIM2Q9C040 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
TRIM2Q9C040 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM2Q9C040 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRIM2Q9C040 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM2Q9C040 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM2Q9C040 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM2Q9C040 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM2Q9C040 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM2Q9C040 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM2Q9C040 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM2Q9C040 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM2Q9C040 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM2Q9C040 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM2Q9C040 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.33■□□□□ 0.69
TRIM2Q9C040 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM2Q9C040 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM2Q9C040 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM2Q9C040 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRIM2Q9C040 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM2Q9C040 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM2Q9C040 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM2Q9C040 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRIM2Q9C040 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM2Q9C040 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM2Q9C040 BX005040.4-201ENST00000637145 1518 ntBASIC19.33■□□□□ 0.68
TRIM2Q9C040 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TRIM2Q9C040 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRIM2Q9C040 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM2Q9C040 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM2Q9C040 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM2Q9C040 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM2Q9C040 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM2Q9C040 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM2Q9C040 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM2Q9C040 AC055733.4-201ENST00000638462 1354 ntBASIC19.32■□□□□ 0.68
TRIM2Q9C040 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM2Q9C040 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM2Q9C040 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM2Q9C040 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM2Q9C040 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM2Q9C040 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.32■□□□□ 0.68
TRIM2Q9C040 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
TRIM2Q9C040 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 AL024507.2-201ENST00000606070 2574 ntBASIC19.32■□□□□ 0.68
TRIM2Q9C040 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM2Q9C040 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM2Q9C040 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRIM2Q9C040 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM2Q9C040 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM2Q9C040 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM2Q9C040 AC005224.4-201ENST00000583262 1652 ntBASIC19.31■□□□□ 0.68
TRIM2Q9C040 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM2Q9C040 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRIM2Q9C040 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM2Q9C040 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM2Q9C040 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM2Q9C040 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM2Q9C040 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM2Q9C040 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms