Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 RPS2P4-201ENST00000476944 856 ntBASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 AC073648.6-201ENST00000641589 218 ntBASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.83■■□□□ 1.73
RTFDC1Q9BY42 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.83■■□□□ 1.72
RTFDC1Q9BY42 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 AP003097.1-201ENST00000530657 1135 ntBASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTFDC1Q9BY42 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTFDC1Q9BY42 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTFDC1Q9BY42 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTFDC1Q9BY42 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
RTFDC1Q9BY42 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.81■■□□□ 1.72
RTFDC1Q9BY42 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.8■■□□□ 1.72
RTFDC1Q9BY42 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTFDC1Q9BY42 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 LSM12P1-201ENST00000411836 588 ntBASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTFDC1Q9BY42 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 AC008403.3-201ENST00000598924 454 ntBASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 KRT17P1-201ENST00000399211 1546 ntBASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTFDC1Q9BY42 AC139530.1-201ENST00000575312 1977 ntBASIC25.76■■□□□ 1.72
RTFDC1Q9BY42 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
RTFDC1Q9BY42 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 UNC93B4-201ENST00000505679 747 ntBASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 FAM21FP-204ENST00000608637 956 ntBASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 AC100791.3-201ENST00000617619 330 ntBASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTFDC1Q9BY42 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms