Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.7■□□□□ 0.58
USB1Q9BQ65 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.7■□□□□ 0.58
USB1Q9BQ65 KRT18P20-201ENST00000548986 1279 ntBASIC18.7■□□□□ 0.58
USB1Q9BQ65 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.7■□□□□ 0.58
USB1Q9BQ65 AC087742.1-201ENST00000575880 1738 ntBASIC18.7■□□□□ 0.58
USB1Q9BQ65 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USB1Q9BQ65 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 AC137767.1-201ENST00000602918 1920 ntBASIC18.69■□□□□ 0.58
USB1Q9BQ65 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 BID-214ENST00000617586 542 ntTSL 5 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.69■□□□□ 0.58
USB1Q9BQ65 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USB1Q9BQ65 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USB1Q9BQ65 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.68■□□□□ 0.58
USB1Q9BQ65 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 AC138907.5-202ENST00000569484 235 ntBASIC18.67■□□□□ 0.58
USB1Q9BQ65 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USB1Q9BQ65 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USB1Q9BQ65 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 GUSBP5-202ENST00000510805 1989 ntBASIC18.66■□□□□ 0.58
USB1Q9BQ65 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
USB1Q9BQ65 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.66■□□□□ 0.58
USB1Q9BQ65 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 AP006587.3-201ENST00000525742 1516 ntBASIC18.66■□□□□ 0.58
USB1Q9BQ65 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USB1Q9BQ65 AC090192.1-201ENST00000517740 490 ntBASIC18.66■□□□□ 0.58
USB1Q9BQ65 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.66■□□□□ 0.58
USB1Q9BQ65 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.66■□□□□ 0.58
USB1Q9BQ65 KRT18P61-201ENST00000585825 1298 ntBASIC18.66■□□□□ 0.58
USB1Q9BQ65 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.66■□□□□ 0.58
USB1Q9BQ65 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 AC104187.1-201ENST00000607510 612 ntBASIC18.66■□□□□ 0.58
USB1Q9BQ65 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USB1Q9BQ65 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USB1Q9BQ65 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USB1Q9BQ65 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USB1Q9BQ65 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USB1Q9BQ65 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
USB1Q9BQ65 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USB1Q9BQ65 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms