Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL13Q99616 KRT18P5-201ENST00000436075 1291 ntBASIC17.67■□□□□ 0.42
CCL13Q99616 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL13Q99616 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.67■□□□□ 0.42
CCL13Q99616 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL13Q99616 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL13Q99616 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.66■□□□□ 0.42
CCL13Q99616 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL13Q99616 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCL13Q99616 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL13Q99616 EEF1DP3-203ENST00000566025 782 ntBASIC17.66■□□□□ 0.42
CCL13Q99616 KRT18P61-201ENST00000585825 1298 ntBASIC17.66■□□□□ 0.42
CCL13Q99616 AC053503.5-201ENST00000601508 636 ntBASIC17.66■□□□□ 0.42
CCL13Q99616 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL13Q99616 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL13Q99616 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.65■□□□□ 0.42
CCL13Q99616 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.65■□□□□ 0.42
CCL13Q99616 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCL13Q99616 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL13Q99616 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL13Q99616 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.64■□□□□ 0.42
CCL13Q99616 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCL13Q99616 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCL13Q99616 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL13Q99616 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CCL13Q99616 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.64■□□□□ 0.41
CCL13Q99616 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.64■□□□□ 0.41
CCL13Q99616 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.64■□□□□ 0.41
CCL13Q99616 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL13Q99616 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL13Q99616 AC244015.2-201ENST00000616358 1861 ntBASIC17.64■□□□□ 0.41
CCL13Q99616 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL13Q99616 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL13Q99616 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCL13Q99616 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL13Q99616 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL13Q99616 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL13Q99616 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL13Q99616 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.63■□□□□ 0.41
CCL13Q99616 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCL13Q99616 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL13Q99616 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCL13Q99616 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL13Q99616 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL13Q99616 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCL13Q99616 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.63■□□□□ 0.41
CCL13Q99616 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms