Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC30.52■■■□□ 2.48
SCAF11Q99590 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 MIR718-201ENST00000390190 70 ntBASIC30.52■■■□□ 2.48
SCAF11Q99590 ECEL1P3-201ENST00000427961 737 ntBASIC30.52■■■□□ 2.48
SCAF11Q99590 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC30.52■■■□□ 2.48
SCAF11Q99590 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC30.52■■■□□ 2.48
SCAF11Q99590 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC30.52■■■□□ 2.48
SCAF11Q99590 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SCAF11Q99590 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC30.51■■■□□ 2.48
SCAF11Q99590 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.51■■■□□ 2.48
SCAF11Q99590 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC30.51■■■□□ 2.48
SCAF11Q99590 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC30.51■■■□□ 2.48
SCAF11Q99590 AL591742.1-201ENST00000604433 565 ntBASIC30.51■■■□□ 2.48
SCAF11Q99590 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SCAF11Q99590 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.48
SCAF11Q99590 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SCAF11Q99590 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.51■■■□□ 2.47
SCAF11Q99590 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
SCAF11Q99590 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
SCAF11Q99590 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SCAF11Q99590 FAM210CP-201ENST00000445714 574 ntBASIC30.5■■■□□ 2.47
SCAF11Q99590 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
SCAF11Q99590 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
SCAF11Q99590 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SCAF11Q99590 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SCAF11Q99590 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SCAF11Q99590 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC30.5■■■□□ 2.47
SCAF11Q99590 MIR1224-201ENST00000408193 85 ntBASIC30.5■■■□□ 2.47
SCAF11Q99590 AC120498.10-201ENST00000621827 505 ntBASIC30.5■■■□□ 2.47
SCAF11Q99590 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.5■■■□□ 2.47
SCAF11Q99590 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC30.5■■■□□ 2.47
SCAF11Q99590 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
SCAF11Q99590 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
SCAF11Q99590 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC30.49■■■□□ 2.47
SCAF11Q99590 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
SCAF11Q99590 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SCAF11Q99590 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC30.49■■■□□ 2.47
SCAF11Q99590 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
SCAF11Q99590 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SCAF11Q99590 LINC00526-201ENST00000581067 1875 ntBASIC30.49■■■□□ 2.47
SCAF11Q99590 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SCAF11Q99590 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.49■■■□□ 2.47
SCAF11Q99590 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SCAF11Q99590 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
SCAF11Q99590 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SCAF11Q99590 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC30.48■■■□□ 2.47
SCAF11Q99590 GXYLT1P3-201ENST00000453058 1193 ntBASIC30.48■■■□□ 2.47
SCAF11Q99590 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SCAF11Q99590 AC060766.5-201ENST00000590539 871 ntBASIC30.48■■■□□ 2.47
SCAF11Q99590 AC243732.1-201ENST00000612648 864 ntBASIC30.48■■■□□ 2.47
SCAF11Q99590 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SCAF11Q99590 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
SCAF11Q99590 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SCAF11Q99590 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF11Q99590 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF11Q99590 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF11Q99590 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF11Q99590 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
SCAF11Q99590 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF11Q99590 GATS-209ENST00000454084 1030 ntTSL 3 BASIC30.47■■■□□ 2.47
SCAF11Q99590 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF11Q99590 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC30.47■■■□□ 2.47
SCAF11Q99590 AC008175.2-201ENST00000612840 297 ntBASIC30.47■■■□□ 2.47
SCAF11Q99590 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF11Q99590 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
SCAF11Q99590 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.47■■■□□ 2.47
SCAF11Q99590 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC30.46■■■□□ 2.47
SCAF11Q99590 KRT16P2-201ENST00000414673 1423 ntBASIC30.46■■■□□ 2.47
SCAF11Q99590 OR7E47P-201ENST00000546390 1422 ntBASIC30.46■■■□□ 2.47
SCAF11Q99590 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF11Q99590 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF11Q99590 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF11Q99590 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
SCAF11Q99590 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF11Q99590 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC30.46■■■□□ 2.47
SCAF11Q99590 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
SCAF11Q99590 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF11Q99590 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF11Q99590 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC30.45■■■□□ 2.47
SCAF11Q99590 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC30.45■■■□□ 2.47
SCAF11Q99590 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC30.45■■■□□ 2.47
SCAF11Q99590 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF11Q99590 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF11Q99590 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF11Q99590 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF11Q99590 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SCAF11Q99590 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF11Q99590 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.44■■■□□ 2.46
SCAF11Q99590 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF11Q99590 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF11Q99590 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF11Q99590 POU5F1P4-201ENST00000413175 1085 ntBASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms