Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP4Q99569 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 AC007375.3-201ENST00000600936 2314 ntBASIC20.54■□□□□ 0.88
PKP4Q99569 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP4Q99569 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP4Q99569 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.54■□□□□ 0.88
PKP4Q99569 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP4Q99569 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.53■□□□□ 0.88
PKP4Q99569 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.53■□□□□ 0.88
PKP4Q99569 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP4Q99569 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.53■□□□□ 0.88
PKP4Q99569 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
PKP4Q99569 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
PKP4Q99569 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP4Q99569 AC026310.3-201ENST00000625186 2373 ntBASIC20.52■□□□□ 0.88
PKP4Q99569 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.52■□□□□ 0.88
PKP4Q99569 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.52■□□□□ 0.88
PKP4Q99569 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.52■□□□□ 0.88
PKP4Q99569 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.52■□□□□ 0.88
PKP4Q99569 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.52■□□□□ 0.88
PKP4Q99569 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.52■□□□□ 0.88
PKP4Q99569 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PKP4Q99569 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.52■□□□□ 0.88
PKP4Q99569 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PKP4Q99569 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP4Q99569 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.52■□□□□ 0.87
PKP4Q99569 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PKP4Q99569 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PKP4Q99569 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.51■□□□□ 0.87
PKP4Q99569 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PKP4Q99569 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.51■□□□□ 0.87
PKP4Q99569 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PKP4Q99569 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.51■□□□□ 0.87
PKP4Q99569 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.51■□□□□ 0.87
PKP4Q99569 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.51■□□□□ 0.87
PKP4Q99569 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.51■□□□□ 0.87
PKP4Q99569 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PKP4Q99569 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.51■□□□□ 0.87
PKP4Q99569 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.51■□□□□ 0.87
PKP4Q99569 AC004854.2-201ENST00000608450 1441 ntBASIC20.51■□□□□ 0.87
PKP4Q99569 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
PKP4Q99569 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 AP004607.4-201ENST00000530158 1459 ntBASIC20.5■□□□□ 0.87
PKP4Q99569 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PKP4Q99569 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PKP4Q99569 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
PKP4Q99569 AC034268.1-201ENST00000441047 882 ntBASIC20.5■□□□□ 0.87
PKP4Q99569 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.5■□□□□ 0.87
PKP4Q99569 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.5■□□□□ 0.87
PKP4Q99569 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.5■□□□□ 0.87
PKP4Q99569 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PKP4Q99569 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP4Q99569 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PKP4Q99569 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PKP4Q99569 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PKP4Q99569 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP4Q99569 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PKP4Q99569 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PKP4Q99569 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.49■□□□□ 0.87
PKP4Q99569 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP4Q99569 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PKP4Q99569 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.49■□□□□ 0.87
PKP4Q99569 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.49■□□□□ 0.87
PKP4Q99569 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.49■□□□□ 0.87
PKP4Q99569 KRT18P61-201ENST00000585825 1298 ntBASIC20.49■□□□□ 0.87
PKP4Q99569 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP4Q99569 AC104187.1-201ENST00000607510 612 ntBASIC20.49■□□□□ 0.87
PKP4Q99569 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.49■□□□□ 0.87
PKP4Q99569 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.49■□□□□ 0.87
PKP4Q99569 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.49■□□□□ 0.87
PKP4Q99569 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PKP4Q99569 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.49■□□□□ 0.87
PKP4Q99569 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PKP4Q99569 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms