Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.17■□□□□ 0.66
SPENQ96T58 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.17■□□□□ 0.66
SPENQ96T58 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.16■□□□□ 0.66
SPENQ96T58 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SPENQ96T58 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SPENQ96T58 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.16■□□□□ 0.66
SPENQ96T58 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SPENQ96T58 RBM17P2-201ENST00000616397 1405 ntBASIC19.16■□□□□ 0.66
SPENQ96T58 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.16■□□□□ 0.66
SPENQ96T58 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SPENQ96T58 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.16■□□□□ 0.66
SPENQ96T58 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPENQ96T58 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.16■□□□□ 0.66
SPENQ96T58 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.15■□□□□ 0.66
SPENQ96T58 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.15■□□□□ 0.66
SPENQ96T58 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.15■□□□□ 0.66
SPENQ96T58 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SPENQ96T58 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.15■□□□□ 0.66
SPENQ96T58 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SPENQ96T58 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SPENQ96T58 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.15■□□□□ 0.66
SPENQ96T58 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SPENQ96T58 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SPENQ96T58 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPENQ96T58 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.15■□□□□ 0.66
SPENQ96T58 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.15■□□□□ 0.66
SPENQ96T58 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPENQ96T58 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SPENQ96T58 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SPENQ96T58 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPENQ96T58 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.14■□□□□ 0.66
SPENQ96T58 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.14■□□□□ 0.66
SPENQ96T58 AP003097.1-201ENST00000530657 1135 ntBASIC19.14■□□□□ 0.66
SPENQ96T58 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.14■□□□□ 0.66
SPENQ96T58 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPENQ96T58 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPENQ96T58 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SPENQ96T58 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SPENQ96T58 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.14■□□□□ 0.65
SPENQ96T58 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.14■□□□□ 0.65
SPENQ96T58 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.14■□□□□ 0.65
SPENQ96T58 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.14■□□□□ 0.65
SPENQ96T58 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.14■□□□□ 0.65
SPENQ96T58 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.14■□□□□ 0.65
SPENQ96T58 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPENQ96T58 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPENQ96T58 LINC01023-201ENST00000606054 436 ntBASIC19.14■□□□□ 0.65
SPENQ96T58 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.14■□□□□ 0.65
SPENQ96T58 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 AC010331.1-201ENST00000611423 582 ntBASIC19.13■□□□□ 0.65
SPENQ96T58 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.13■□□□□ 0.65
SPENQ96T58 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SPENQ96T58 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SPENQ96T58 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.13■□□□□ 0.65
SPENQ96T58 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.13■□□□□ 0.65
SPENQ96T58 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.13■□□□□ 0.65
SPENQ96T58 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.13■□□□□ 0.65
SPENQ96T58 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.13■□□□□ 0.65
SPENQ96T58 AC142381.4-202ENST00000563973 229 ntBASIC19.13■□□□□ 0.65
SPENQ96T58 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SPENQ96T58 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SPENQ96T58 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPENQ96T58 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.12■□□□□ 0.65
SPENQ96T58 AC061975.6-201ENST00000579045 1553 ntBASIC19.12■□□□□ 0.65
SPENQ96T58 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPENQ96T58 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SPENQ96T58 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPENQ96T58 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms