Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.74■□□□□ 0.91
PCDH15Q96QU1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 AC073648.6-201ENST00000641589 218 ntBASIC20.73■□□□□ 0.91
PCDH15Q96QU1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH15Q96QU1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 RPS2P4-201ENST00000476944 856 ntBASIC20.72■□□□□ 0.91
PCDH15Q96QU1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 C9orf163-202ENST00000624034 2573 ntBASIC20.72■□□□□ 0.91
PCDH15Q96QU1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 AL591742.1-201ENST00000604433 565 ntBASIC20.72■□□□□ 0.91
PCDH15Q96QU1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDH15Q96QU1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 AC008550.1-201ENST00000511500 884 ntBASIC20.71■□□□□ 0.91
PCDH15Q96QU1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH15Q96QU1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 KRT17P1-201ENST00000399211 1546 ntBASIC20.7■□□□□ 0.9
PCDH15Q96QU1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 AL359736.2-201ENST00000621992 437 ntBASIC20.7■□□□□ 0.9
PCDH15Q96QU1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH15Q96QU1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 AC060766.5-201ENST00000590539 871 ntBASIC20.69■□□□□ 0.9
PCDH15Q96QU1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PCDH15Q96QU1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 AL355472.2-201ENST00000422958 438 ntBASIC20.68■□□□□ 0.9
PCDH15Q96QU1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH15Q96QU1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 AC061975.6-201ENST00000579045 1553 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms