Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 KRT18P20-201ENST00000548986 1279 ntBASIC21.74■■□□□ 1.07
RPRD1AQ96P16 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.74■■□□□ 1.07
RPRD1AQ96P16 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 FBXW4P1-201ENST00000426721 2239 ntBASIC21.73■■□□□ 1.07
RPRD1AQ96P16 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPRD1AQ96P16 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 POU5F1P4-201ENST00000413175 1085 ntBASIC21.72■■□□□ 1.07
RPRD1AQ96P16 SLC7A5P2-201ENST00000553010 536 ntBASIC21.72■■□□□ 1.07
RPRD1AQ96P16 BID-214ENST00000617586 542 ntTSL 5 BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 AC120498.10-201ENST00000621827 505 ntBASIC21.72■■□□□ 1.07
RPRD1AQ96P16 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.72■■□□□ 1.07
RPRD1AQ96P16 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 AC061975.6-201ENST00000579045 1553 ntBASIC21.71■■□□□ 1.07
RPRD1AQ96P16 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.71■■□□□ 1.07
RPRD1AQ96P16 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.71■■□□□ 1.07
RPRD1AQ96P16 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RPRD1AQ96P16 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RPRD1AQ96P16 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 MYCNOS-205ENST00000641950 531 ntBASIC21.7■■□□□ 1.06
RPRD1AQ96P16 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPRD1AQ96P16 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPRD1AQ96P16 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms