Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CFAP53Q96M91 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.26■■■□□ 2.11
CFAP53Q96M91 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.26■■■□□ 2.11
CFAP53Q96M91 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.26■■■□□ 2.11
CFAP53Q96M91 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 MFSD11-216ENST00000590393 1141 ntBASIC28.26■■■□□ 2.11
CFAP53Q96M91 AC080038.1-201ENST00000611274 1154 ntBASIC28.26■■■□□ 2.11
CFAP53Q96M91 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC28.26■■■□□ 2.11
CFAP53Q96M91 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP53Q96M91 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.26■■■□□ 2.11
CFAP53Q96M91 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
CFAP53Q96M91 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 NARF-205ENST00000412079 1760 ntTSL 5 BASIC28.25■■■□□ 2.11
CFAP53Q96M91 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC28.25■■■□□ 2.11
CFAP53Q96M91 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.25■■■□□ 2.11
CFAP53Q96M91 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 KRT16P2-201ENST00000414673 1423 ntBASIC28.25■■■□□ 2.11
CFAP53Q96M91 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP53Q96M91 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP53Q96M91 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP53Q96M91 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
CFAP53Q96M91 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CFAP53Q96M91 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP53Q96M91 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP53Q96M91 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.24■■■□□ 2.11
CFAP53Q96M91 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.24■■■□□ 2.11
CFAP53Q96M91 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP53Q96M91 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP53Q96M91 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP53Q96M91 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP53Q96M91 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP53Q96M91 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC28.23■■■□□ 2.11
CFAP53Q96M91 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP53Q96M91 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP53Q96M91 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CFAP53Q96M91 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP53Q96M91 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP53Q96M91 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP53Q96M91 STX5-203ENST00000394690 1568 ntTSL 5 BASIC28.22■■■□□ 2.11
CFAP53Q96M91 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC28.22■■■□□ 2.11
CFAP53Q96M91 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP53Q96M91 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
CFAP53Q96M91 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP53Q96M91 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP53Q96M91 MFF-203ENST00000349901 1716 ntTSL 2 BASIC28.21■■■□□ 2.11
CFAP53Q96M91 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP53Q96M91 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC28.21■■■□□ 2.11
CFAP53Q96M91 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC28.21■■■□□ 2.11
CFAP53Q96M91 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CFAP53Q96M91 RARRES2P11-201ENST00000635158 484 ntBASIC28.21■■■□□ 2.11
CFAP53Q96M91 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP53Q96M91 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CFAP53Q96M91 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC28.21■■■□□ 2.11
CFAP53Q96M91 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.11
CFAP53Q96M91 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
CFAP53Q96M91 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CFAP53Q96M91 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CFAP53Q96M91 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP53Q96M91 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP53Q96M91 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.1
CFAP53Q96M91 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP53Q96M91 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.2■■■□□ 2.1
CFAP53Q96M91 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.2■■■□□ 2.1
CFAP53Q96M91 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP53Q96M91 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
CFAP53Q96M91 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
CFAP53Q96M91 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
CFAP53Q96M91 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC28.2■■■□□ 2.1
CFAP53Q96M91 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP53Q96M91 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP53Q96M91 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP53Q96M91 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP53Q96M91 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC28.19■■■□□ 2.1
CFAP53Q96M91 AC073111.5-205ENST00000641717 521 ntBASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms