Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRC46Q96FV0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
LRRC46Q96FV0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.89■□□□□ 0.61
LRRC46Q96FV0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 KRT18P20-201ENST00000548986 1279 ntBASIC18.89■□□□□ 0.61
LRRC46Q96FV0 AP001160.3-201ENST00000601484 763 ntBASIC18.89■□□□□ 0.61
LRRC46Q96FV0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC46Q96FV0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 AC127496.7-201ENST00000625110 1798 ntBASIC18.88■□□□□ 0.61
LRRC46Q96FV0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 SLC29A4P1-201ENST00000398760 971 ntBASIC18.88■□□□□ 0.61
LRRC46Q96FV0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 MFSD11-216ENST00000590393 1141 ntBASIC18.88■□□□□ 0.61
LRRC46Q96FV0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC46Q96FV0 LINC00526-201ENST00000581067 1875 ntBASIC18.88■□□□□ 0.61
LRRC46Q96FV0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 LINC01960-201ENST00000563759 1884 ntBASIC18.87■□□□□ 0.61
LRRC46Q96FV0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 MYCNOS-205ENST00000641950 531 ntBASIC18.87■□□□□ 0.61
LRRC46Q96FV0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC46Q96FV0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 AC092068.2-201ENST00000590491 1708 ntBASIC18.86■□□□□ 0.61
LRRC46Q96FV0 OR7E47P-201ENST00000546390 1422 ntBASIC18.86■□□□□ 0.61
LRRC46Q96FV0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 AC005181.1-201ENST00000604782 1256 ntBASIC18.86■□□□□ 0.61
LRRC46Q96FV0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.86■□□□□ 0.61
LRRC46Q96FV0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC46Q96FV0 AP004607.7-201ENST00000527152 1677 ntBASIC18.85■□□□□ 0.61
LRRC46Q96FV0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC46Q96FV0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC46Q96FV0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC46Q96FV0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC46Q96FV0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC46Q96FV0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms