Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 ECEL1P3-201ENST00000427961 737 ntBASIC21.29■■□□□ 1
CLDN23Q96B33 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN23Q96B33 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.29■■□□□ 1
CLDN23Q96B33 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.29■■□□□ 1
CLDN23Q96B33 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.29■■□□□ 1
CLDN23Q96B33 CYP2T3P-201ENST00000601990 817 ntBASIC21.29■■□□□ 1
CLDN23Q96B33 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.29■■□□□ 1
CLDN23Q96B33 FAM197Y4-202ENST00000622692 608 ntBASIC21.29■■□□□ 1
CLDN23Q96B33 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.29■■□□□ 1
CLDN23Q96B33 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLDN23Q96B33 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CLDN23Q96B33 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN23Q96B33 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.29■■□□□ 1
CLDN23Q96B33 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CLDN23Q96B33 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN23Q96B33 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.28■■□□□ 1
CLDN23Q96B33 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN23Q96B33 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN23Q96B33 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CLDN23Q96B33 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN23Q96B33 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN23Q96B33 RN7SL471P-201ENST00000580476 299 ntBASIC21.28■■□□□ 1
CLDN23Q96B33 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.28■■□□□ 1
CLDN23Q96B33 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN23Q96B33 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.28■■□□□ 1
CLDN23Q96B33 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN23Q96B33 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLDN23Q96B33 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLDN23Q96B33 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN23Q96B33 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLDN23Q96B33 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN23Q96B33 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN23Q96B33 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN23Q96B33 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN23Q96B33 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CLDN23Q96B33 FAM210CP-201ENST00000445714 574 ntBASIC21.27■■□□□ 1
CLDN23Q96B33 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.27■■□□□ 1
CLDN23Q96B33 C1QBPP2-201ENST00000528754 825 ntBASIC21.27■■□□□ 1
CLDN23Q96B33 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.27■■□□□ 1
CLDN23Q96B33 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.27■■□□□ 1
CLDN23Q96B33 Z99916.2-201ENST00000604037 246 ntBASIC21.27■■□□□ 1
CLDN23Q96B33 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.27■■□□□ 1
CLDN23Q96B33 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN23Q96B33 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN23Q96B33 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.27■■□□□ 1
CLDN23Q96B33 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLDN23Q96B33 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.27■□□□□ 0.99
CLDN23Q96B33 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN23Q96B33 KRT17P3-201ENST00000420566 1262 ntBASIC21.26■□□□□ 0.99
CLDN23Q96B33 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN23Q96B33 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN23Q96B33 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.26■□□□□ 0.99
CLDN23Q96B33 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN23Q96B33 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN23Q96B33 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN23Q96B33 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN23Q96B33 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
CLDN23Q96B33 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDN23Q96B33 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN23Q96B33 AC211429.1-201ENST00000415277 523 ntBASIC21.25■□□□□ 0.99
CLDN23Q96B33 AC091799.1-201ENST00000422823 811 ntBASIC21.25■□□□□ 0.99
CLDN23Q96B33 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLDN23Q96B33 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN23Q96B33 PNMA6B-201ENST00000538162 1200 ntBASIC21.25■□□□□ 0.99
CLDN23Q96B33 REXO1L12P-201ENST00000622156 912 ntBASIC21.25■□□□□ 0.99
CLDN23Q96B33 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN23Q96B33 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CLDN23Q96B33 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN23Q96B33 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN23Q96B33 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 MIR1224-201ENST00000408193 85 ntBASIC21.24■□□□□ 0.99
CLDN23Q96B33 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN23Q96B33 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.24■□□□□ 0.99
CLDN23Q96B33 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.23■□□□□ 0.99
CLDN23Q96B33 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.23■□□□□ 0.99
CLDN23Q96B33 AL589743.5-201ENST00000616611 1050 ntBASIC21.23■□□□□ 0.99
CLDN23Q96B33 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN23Q96B33 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms