Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPNE4Q96A23 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE4Q96A23 EP400NL-214ENST00000641289 2402 ntBASIC18.91■□□□□ 0.62
CPNE4Q96A23 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE4Q96A23 POU5F1P4-201ENST00000413175 1085 ntBASIC18.9■□□□□ 0.62
CPNE4Q96A23 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 AL137784.2-201ENST00000607332 1000 ntBASIC18.9■□□□□ 0.62
CPNE4Q96A23 AC120498.10-201ENST00000621827 505 ntBASIC18.9■□□□□ 0.62
CPNE4Q96A23 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CPNE4Q96A23 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE4Q96A23 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE4Q96A23 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPNE4Q96A23 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE4Q96A23 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE4Q96A23 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE4Q96A23 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE4Q96A23 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE4Q96A23 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE4Q96A23 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE4Q96A23 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE4Q96A23 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CPNE4Q96A23 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CPNE4Q96A23 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CPNE4Q96A23 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE4Q96A23 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE4Q96A23 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE4Q96A23 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE4Q96A23 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE4Q96A23 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 AC006015.1-201ENST00000429970 570 ntBASIC18.88■□□□□ 0.61
CPNE4Q96A23 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.88■□□□□ 0.61
CPNE4Q96A23 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE4Q96A23 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE4Q96A23 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CPNE4Q96A23 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE4Q96A23 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CPNE4Q96A23 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE4Q96A23 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE4Q96A23 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CPNE4Q96A23 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE4Q96A23 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CPNE4Q96A23 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE4Q96A23 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE4Q96A23 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE4Q96A23 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE4Q96A23 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE4Q96A23 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE4Q96A23 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.86■□□□□ 0.61
CPNE4Q96A23 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 IKBKGP1-201ENST00000612193 1073 ntBASIC18.86■□□□□ 0.61
CPNE4Q96A23 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE4Q96A23 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE4Q96A23 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms