Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.61■□□□□ 0.57
USP9XQ93008 AP006587.3-201ENST00000525742 1516 ntBASIC18.61■□□□□ 0.57
USP9XQ93008 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP9XQ93008 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
USP9XQ93008 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP9XQ93008 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.61■□□□□ 0.57
USP9XQ93008 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP9XQ93008 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.61■□□□□ 0.57
USP9XQ93008 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.61■□□□□ 0.57
USP9XQ93008 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP9XQ93008 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.61■□□□□ 0.57
USP9XQ93008 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP9XQ93008 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.61■□□□□ 0.57
USP9XQ93008 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.61■□□□□ 0.57
USP9XQ93008 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP9XQ93008 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP9XQ93008 LINC01960-201ENST00000563759 1884 ntBASIC18.6■□□□□ 0.57
USP9XQ93008 AC092865.7-201ENST00000641832 219 ntBASIC18.6■□□□□ 0.57
USP9XQ93008 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.6■□□□□ 0.57
USP9XQ93008 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP9XQ93008 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.6■□□□□ 0.57
USP9XQ93008 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP9XQ93008 AC145676.1-201ENST00000514988 2004 ntBASIC18.6■□□□□ 0.57
USP9XQ93008 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP9XQ93008 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP9XQ93008 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.6■□□□□ 0.57
USP9XQ93008 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP9XQ93008 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
USP9XQ93008 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
USP9XQ93008 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.59■□□□□ 0.57
USP9XQ93008 AP001412.1-201ENST00000608405 714 ntBASIC18.59■□□□□ 0.57
USP9XQ93008 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP9XQ93008 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP9XQ93008 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.59■□□□□ 0.57
USP9XQ93008 LSM12P1-201ENST00000411836 588 ntBASIC18.59■□□□□ 0.57
USP9XQ93008 KRT17P3-201ENST00000420566 1262 ntBASIC18.59■□□□□ 0.57
USP9XQ93008 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
USP9XQ93008 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.59■□□□□ 0.57
USP9XQ93008 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.59■□□□□ 0.57
USP9XQ93008 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.59■□□□□ 0.57
USP9XQ93008 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP9XQ93008 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
USP9XQ93008 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP9XQ93008 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP9XQ93008 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP9XQ93008 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.58■□□□□ 0.57
USP9XQ93008 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.58■□□□□ 0.57
USP9XQ93008 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.58■□□□□ 0.57
USP9XQ93008 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.58■□□□□ 0.57
USP9XQ93008 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.58■□□□□ 0.57
USP9XQ93008 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.58■□□□□ 0.57
USP9XQ93008 AC138932.3-201ENST00000567634 1902 ntBASIC18.58■□□□□ 0.57
USP9XQ93008 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP9XQ93008 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP9XQ93008 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP9XQ93008 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.58■□□□□ 0.56
USP9XQ93008 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.58■□□□□ 0.56
USP9XQ93008 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP9XQ93008 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP9XQ93008 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
USP9XQ93008 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP9XQ93008 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP9XQ93008 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP9XQ93008 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
USP9XQ93008 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
USP9XQ93008 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP9XQ93008 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP9XQ93008 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP9XQ93008 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
USP9XQ93008 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.57■□□□□ 0.56
USP9XQ93008 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.57■□□□□ 0.56
USP9XQ93008 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP9XQ93008 AC004812.2-201ENST00000611079 2094 ntBASIC18.57■□□□□ 0.56
USP9XQ93008 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 AC133681.1-201ENST00000465482 601 ntBASIC18.56■□□□□ 0.56
USP9XQ93008 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.56■□□□□ 0.56
USP9XQ93008 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.56■□□□□ 0.56
USP9XQ93008 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.56■□□□□ 0.56
USP9XQ93008 MTDHP1-201ENST00000605323 784 ntBASIC18.56■□□□□ 0.56
USP9XQ93008 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP9XQ93008 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP9XQ93008 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP9XQ93008 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
USP9XQ93008 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP9XQ93008 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP9XQ93008 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
USP9XQ93008 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.55■□□□□ 0.56
USP9XQ93008 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.55■□□□□ 0.56
USP9XQ93008 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP9XQ93008 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP9XQ93008 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.55■□□□□ 0.56
USP9XQ93008 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.55■□□□□ 0.56
USP9XQ93008 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.55■□□□□ 0.56
USP9XQ93008 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms