Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SMARCC1Q92922 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC1Q92922 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC1Q92922 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC1Q92922 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 NME6-213ENST00000451657 871 ntTSL 2 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 RHOD-202ENST00000532559 538 ntTSL 3 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC1Q92922 AC060766.5-201ENST00000590539 871 ntBASIC27.2■■□□□ 1.94
SMARCC1Q92922 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMARCC1Q92922 FAM21FP-204ENST00000608637 956 ntBASIC27.2■■□□□ 1.94
SMARCC1Q92922 AL359736.2-201ENST00000621992 437 ntBASIC27.2■■□□□ 1.94
SMARCC1Q92922 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.2■■□□□ 1.94
SMARCC1Q92922 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC1Q92922 MME-217ENST00000616757 1315 ntTSL 5 BASIC27.19■■□□□ 1.94
SMARCC1Q92922 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC1Q92922 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC1Q92922 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC1Q92922 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC1Q92922 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
SMARCC1Q92922 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SMARCC1Q92922 AC008403.3-201ENST00000598924 454 ntBASIC27.19■■□□□ 1.94
SMARCC1Q92922 HLA-B-256ENST00000639848 1089 ntBASIC27.19■■□□□ 1.94
SMARCC1Q92922 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC1Q92922 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC27.19■■□□□ 1.94
SMARCC1Q92922 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.19■■□□□ 1.94
SMARCC1Q92922 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.19■■□□□ 1.94
SMARCC1Q92922 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMARCC1Q92922 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SMARCC1Q92922 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC1Q92922 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC1Q92922 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC1Q92922 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.18■■□□□ 1.94
SMARCC1Q92922 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC27.18■■□□□ 1.94
SMARCC1Q92922 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.18■■□□□ 1.94
SMARCC1Q92922 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
SMARCC1Q92922 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC1Q92922 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SMARCC1Q92922 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMARCC1Q92922 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMARCC1Q92922 AL355472.2-201ENST00000422958 438 ntBASIC27.17■■□□□ 1.94
SMARCC1Q92922 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
SMARCC1Q92922 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SMARCC1Q92922 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMARCC1Q92922 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC1Q92922 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SMARCC1Q92922 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC1Q92922 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SMARCC1Q92922 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC1Q92922 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC1Q92922 CYP2T3P-201ENST00000601990 817 ntBASIC27.16■■□□□ 1.94
SMARCC1Q92922 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
SMARCC1Q92922 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMARCC1Q92922 AC087742.1-201ENST00000575880 1738 ntBASIC27.16■■□□□ 1.94
SMARCC1Q92922 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC1Q92922 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC1Q92922 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC1Q92922 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
SMARCC1Q92922 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC27.15■■□□□ 1.94
SMARCC1Q92922 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC27.15■■□□□ 1.94
SMARCC1Q92922 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC27.15■■□□□ 1.94
SMARCC1Q92922 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC27.15■■□□□ 1.94
SMARCC1Q92922 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC1Q92922 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMARCC1Q92922 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.15■■□□□ 1.94
SMARCC1Q92922 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMARCC1Q92922 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SMARCC1Q92922 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC27.14■■□□□ 1.94
SMARCC1Q92922 AC091799.1-201ENST00000422823 811 ntBASIC27.14■■□□□ 1.94
SMARCC1Q92922 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMARCC1Q92922 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
SMARCC1Q92922 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.14■■□□□ 1.93
SMARCC1Q92922 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.14■■□□□ 1.93
SMARCC1Q92922 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 MIR718-201ENST00000390190 70 ntBASIC27.13■■□□□ 1.93
SMARCC1Q92922 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMARCC1Q92922 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMARCC1Q92922 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC27.13■■□□□ 1.93
SMARCC1Q92922 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SMARCC1Q92922 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMARCC1Q92922 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC27.12■■□□□ 1.93
SMARCC1Q92922 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMARCC1Q92922 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SMARCC1Q92922 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SMARCC1Q92922 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC27.12■■□□□ 1.93
SMARCC1Q92922 CDV3P1-201ENST00000471403 739 ntBASIC27.12■■□□□ 1.93
SMARCC1Q92922 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms