Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.01■■□□□ 1.43
USP6NLQ92738 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
USP6NLQ92738 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
USP6NLQ92738 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
USP6NLQ92738 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
USP6NLQ92738 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.01■■□□□ 1.43
USP6NLQ92738 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
USP6NLQ92738 AP003097.1-201ENST00000530657 1135 ntBASIC24.01■■□□□ 1.43
USP6NLQ92738 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.01■■□□□ 1.43
USP6NLQ92738 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.01■■□□□ 1.43
USP6NLQ92738 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.01■■□□□ 1.43
USP6NLQ92738 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
USP6NLQ92738 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.01■■□□□ 1.43
USP6NLQ92738 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24■■□□□ 1.43
USP6NLQ92738 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24■■□□□ 1.43
USP6NLQ92738 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USP6NLQ92738 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24■■□□□ 1.43
USP6NLQ92738 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24■■□□□ 1.43
USP6NLQ92738 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24■■□□□ 1.43
USP6NLQ92738 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USP6NLQ92738 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
USP6NLQ92738 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24■■□□□ 1.43
USP6NLQ92738 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USP6NLQ92738 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USP6NLQ92738 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24■■□□□ 1.43
USP6NLQ92738 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.99■■□□□ 1.43
USP6NLQ92738 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.99■■□□□ 1.43
USP6NLQ92738 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
USP6NLQ92738 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.99■■□□□ 1.43
USP6NLQ92738 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.99■■□□□ 1.43
USP6NLQ92738 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
USP6NLQ92738 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.99■■□□□ 1.43
USP6NLQ92738 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.99■■□□□ 1.43
USP6NLQ92738 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.99■■□□□ 1.43
USP6NLQ92738 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP6NLQ92738 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP6NLQ92738 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
USP6NLQ92738 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.98■■□□□ 1.43
USP6NLQ92738 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP6NLQ92738 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6NLQ92738 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
USP6NLQ92738 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.98■■□□□ 1.43
USP6NLQ92738 UNC93B4-201ENST00000505679 747 ntBASIC23.98■■□□□ 1.43
USP6NLQ92738 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.98■■□□□ 1.43
USP6NLQ92738 AC008403.3-201ENST00000598924 454 ntBASIC23.98■■□□□ 1.43
USP6NLQ92738 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP6NLQ92738 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.98■■□□□ 1.43
USP6NLQ92738 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.98■■□□□ 1.43
USP6NLQ92738 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP6NLQ92738 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6NLQ92738 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6NLQ92738 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6NLQ92738 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6NLQ92738 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP6NLQ92738 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
USP6NLQ92738 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
USP6NLQ92738 KRT17P1-201ENST00000399211 1546 ntBASIC23.97■■□□□ 1.43
USP6NLQ92738 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.97■■□□□ 1.43
USP6NLQ92738 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.97■■□□□ 1.43
USP6NLQ92738 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6NLQ92738 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6NLQ92738 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.96■■□□□ 1.43
USP6NLQ92738 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6NLQ92738 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
USP6NLQ92738 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP6NLQ92738 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6NLQ92738 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
USP6NLQ92738 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6NLQ92738 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USP6NLQ92738 LSM12P1-201ENST00000411836 588 ntBASIC23.96■■□□□ 1.43
USP6NLQ92738 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.96■■□□□ 1.43
USP6NLQ92738 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
USP6NLQ92738 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.95■■□□□ 1.43
USP6NLQ92738 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP6NLQ92738 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.95■■□□□ 1.42
USP6NLQ92738 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.95■■□□□ 1.42
USP6NLQ92738 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP6NLQ92738 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.95■■□□□ 1.42
USP6NLQ92738 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.95■■□□□ 1.42
USP6NLQ92738 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
USP6NLQ92738 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP6NLQ92738 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP6NLQ92738 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP6NLQ92738 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
USP6NLQ92738 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6NLQ92738 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
USP6NLQ92738 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
USP6NLQ92738 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USP6NLQ92738 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6NLQ92738 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USP6NLQ92738 AL355472.2-201ENST00000422958 438 ntBASIC23.94■■□□□ 1.42
USP6NLQ92738 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
USP6NLQ92738 AC008550.1-201ENST00000511500 884 ntBASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms