Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.86■□□□□ 0.77
TM9SF4Q92544 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF4Q92544 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 AC104187.1-201ENST00000607510 612 ntBASIC19.86■□□□□ 0.77
TM9SF4Q92544 AC231657.2-201ENST00000624556 255 ntBASIC19.86■□□□□ 0.77
TM9SF4Q92544 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF4Q92544 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF4Q92544 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM9SF4Q92544 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TM9SF4Q92544 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TM9SF4Q92544 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TM9SF4Q92544 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.84■□□□□ 0.77
TM9SF4Q92544 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.84■□□□□ 0.77
TM9SF4Q92544 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.84■□□□□ 0.77
TM9SF4Q92544 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
TM9SF4Q92544 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM9SF4Q92544 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TM9SF4Q92544 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.83■□□□□ 0.77
TM9SF4Q92544 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.83■□□□□ 0.77
TM9SF4Q92544 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.83■□□□□ 0.77
TM9SF4Q92544 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TM9SF4Q92544 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.83■□□□□ 0.77
TM9SF4Q92544 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.83■□□□□ 0.77
TM9SF4Q92544 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.83■□□□□ 0.77
TM9SF4Q92544 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM9SF4Q92544 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM9SF4Q92544 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM9SF4Q92544 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TM9SF4Q92544 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.83■□□□□ 0.76
TM9SF4Q92544 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TM9SF4Q92544 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.82■□□□□ 0.76
TM9SF4Q92544 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 MFSD11-216ENST00000590393 1141 ntBASIC19.82■□□□□ 0.76
TM9SF4Q92544 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.82■□□□□ 0.76
TM9SF4Q92544 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM9SF4Q92544 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF4Q92544 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF4Q92544 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF4Q92544 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF4Q92544 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 AC007322.1-201ENST00000426983 750 ntBASIC19.81■□□□□ 0.76
TM9SF4Q92544 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 AL121832.2-201ENST00000610979 668 ntBASIC19.81■□□□□ 0.76
TM9SF4Q92544 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF4Q92544 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF4Q92544 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.81■□□□□ 0.76
TM9SF4Q92544 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM9SF4Q92544 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.8■□□□□ 0.76
TM9SF4Q92544 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.8■□□□□ 0.76
TM9SF4Q92544 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM9SF4Q92544 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms