Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 UNC93B7-201ENST00000509439 705 ntBASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 SAPCD2P2-201ENST00000431719 1174 ntBASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 AC145676.1-201ENST00000514988 2004 ntBASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 AP000525.1-201ENST00000608286 694 ntBASIC8.73□□□□□ -1.01
SYNE2Q8WXH0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 AC092865.5-201ENST00000545435 363 ntBASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 AL162412.1-201ENST00000567129 965 ntBASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 MIR564-202ENST00000385049 94 ntBASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYNE2Q8WXH0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 AC009237.3-201ENST00000393279 1427 ntBASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC8.71□□□□□ -1.01
SYNE2Q8WXH0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 AC142472.1-201ENST00000612013 1741 ntBASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 AC027796.2-201ENST00000575326 344 ntBASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 ATP5G1P1-201ENST00000448724 379 ntBASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 MIR3197-201ENST00000582241 73 ntBASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SYNE2Q8WXH0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms