Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 AC123595.1-201ENST00000440769 1046 ntBASIC20.55■□□□□ 0.88
ATL1Q8WXF7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATL1Q8WXF7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 AC026310.3-201ENST00000625186 2373 ntBASIC20.54■□□□□ 0.88
ATL1Q8WXF7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
ATL1Q8WXF7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 AC079140.4-201ENST00000507448 529 ntBASIC20.53■□□□□ 0.88
ATL1Q8WXF7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATL1Q8WXF7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.52■□□□□ 0.88
ATL1Q8WXF7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATL1Q8WXF7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.52■□□□□ 0.88
ATL1Q8WXF7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATL1Q8WXF7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATL1Q8WXF7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATL1Q8WXF7 YBX1P1-201ENST00000445822 960 ntBASIC20.52■□□□□ 0.88
ATL1Q8WXF7 AL121603.2-201ENST00000557373 2117 ntBASIC20.52■□□□□ 0.88
ATL1Q8WXF7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.52■□□□□ 0.88
ATL1Q8WXF7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATL1Q8WXF7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
ATL1Q8WXF7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATL1Q8WXF7 AC007375.3-201ENST00000600936 2314 ntBASIC20.52■□□□□ 0.87
ATL1Q8WXF7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 ZNRF2P3-201ENST00000424200 374 ntBASIC20.51■□□□□ 0.87
ATL1Q8WXF7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 AC053503.5-201ENST00000601508 636 ntBASIC20.51■□□□□ 0.87
ATL1Q8WXF7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.51■□□□□ 0.87
ATL1Q8WXF7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.5■□□□□ 0.87
ATL1Q8WXF7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms