Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CASKIN1Q8WXD9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CASKIN1Q8WXD9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CASKIN1Q8WXD9 AC010542.4-201ENST00000563151 1910 ntBASIC33.05■■■□□ 2.88
CASKIN1Q8WXD9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
CASKIN1Q8WXD9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
CASKIN1Q8WXD9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
CASKIN1Q8WXD9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 AC068473.5-201ENST00000616428 2072 ntBASIC33.04■■■□□ 2.88
CASKIN1Q8WXD9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 AC091874.3-201ENST00000512672 1195 ntBASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC33.03■■■□□ 2.88
CASKIN1Q8WXD9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC33.02■■■□□ 2.88
CASKIN1Q8WXD9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CASKIN1Q8WXD9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 POU5F1P3-201ENST00000428824 1078 ntBASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 RNA5SP413-201ENST00000516373 109 ntBASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 FAM21FP-204ENST00000608637 956 ntBASIC33.01■■■□□ 2.87
CASKIN1Q8WXD9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 C9orf163-202ENST00000624034 2573 ntBASIC33■■■□□ 2.87
CASKIN1Q8WXD9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 C11orf96-202ENST00000528572 1834 ntBASIC33■■■□□ 2.87
CASKIN1Q8WXD9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 DUSP5P2-201ENST00000426873 1033 ntBASIC33■■■□□ 2.87
CASKIN1Q8WXD9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC33■■■□□ 2.87
CASKIN1Q8WXD9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CASKIN1Q8WXD9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.98■■■□□ 2.87
CASKIN1Q8WXD9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.97■■■□□ 2.87
CASKIN1Q8WXD9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms