Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF139Q8WU17 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF139Q8WU17 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF139Q8WU17 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF139Q8WU17 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF139Q8WU17 AP001160.3-201ENST00000601484 763 ntBASIC22.15■■□□□ 1.14
RNF139Q8WU17 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF139Q8WU17 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF139Q8WU17 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF139Q8WU17 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF139Q8WU17 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF139Q8WU17 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF139Q8WU17 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF139Q8WU17 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF139Q8WU17 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF139Q8WU17 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF139Q8WU17 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.14■■□□□ 1.14
RNF139Q8WU17 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF139Q8WU17 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF139Q8WU17 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF139Q8WU17 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 AC138907.5-202ENST00000569484 235 ntBASIC22.14■■□□□ 1.13
RNF139Q8WU17 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF139Q8WU17 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF139Q8WU17 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF139Q8WU17 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.14■■□□□ 1.13
RNF139Q8WU17 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF139Q8WU17 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF139Q8WU17 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF139Q8WU17 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF139Q8WU17 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF139Q8WU17 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF139Q8WU17 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF139Q8WU17 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF139Q8WU17 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF139Q8WU17 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF139Q8WU17 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF139Q8WU17 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 AC010141.2-201ENST00000452426 721 ntBASIC22.12■■□□□ 1.13
RNF139Q8WU17 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF139Q8WU17 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
RNF139Q8WU17 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.12■■□□□ 1.13
RNF139Q8WU17 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF139Q8WU17 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF139Q8WU17 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF139Q8WU17 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF139Q8WU17 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF139Q8WU17 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
RNF139Q8WU17 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF139Q8WU17 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF139Q8WU17 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF139Q8WU17 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RNF139Q8WU17 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF139Q8WU17 AC092437.1-201ENST00000624794 1048 ntBASIC22.1■■□□□ 1.13
RNF139Q8WU17 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RNF139Q8WU17 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.1■■□□□ 1.13
RNF139Q8WU17 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF139Q8WU17 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
RNF139Q8WU17 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF139Q8WU17 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF139Q8WU17 AC004911.1-201ENST00000416316 871 ntBASIC22.09■■□□□ 1.13
RNF139Q8WU17 AC006015.1-201ENST00000429970 570 ntBASIC22.09■■□□□ 1.13
RNF139Q8WU17 KRT18P11-201ENST00000435214 1283 ntBASIC22.09■■□□□ 1.13
RNF139Q8WU17 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF139Q8WU17 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms