Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 AC083880.1-201ENST00000608266 535 ntBASIC18.3■□□□□ 0.52
LINC01560Q8TB33 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.3■□□□□ 0.52
LINC01560Q8TB33 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 RARRES2P4-201ENST00000514074 484 ntBASIC18.29■□□□□ 0.52
LINC01560Q8TB33 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01560Q8TB33 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 AC093827.2-201ENST00000512654 315 ntBASIC18.28■□□□□ 0.52
LINC01560Q8TB33 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
LINC01560Q8TB33 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 PRORSD1P-201ENST00000295112 541 ntBASIC18.27■□□□□ 0.52
LINC01560Q8TB33 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 DUSP5P2-201ENST00000426873 1033 ntBASIC18.27■□□□□ 0.52
LINC01560Q8TB33 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 AC091874.3-201ENST00000512672 1195 ntBASIC18.27■□□□□ 0.52
LINC01560Q8TB33 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 AC243732.1-201ENST00000612648 864 ntBASIC18.27■□□□□ 0.52
LINC01560Q8TB33 MYC-209ENST00000641252 345 ntBASIC18.27■□□□□ 0.52
LINC01560Q8TB33 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01560Q8TB33 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LINC01560Q8TB33 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01560Q8TB33 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
LINC01560Q8TB33 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01560Q8TB33 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 AC092053.2-201ENST00000640557 1818 ntBASIC18.26■□□□□ 0.51
LINC01560Q8TB33 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.26■□□□□ 0.51
LINC01560Q8TB33 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 AL162412.1-201ENST00000567129 965 ntBASIC18.26■□□□□ 0.51
LINC01560Q8TB33 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01560Q8TB33 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LINC01560Q8TB33 ESRRAP1-201ENST00000400596 1257 ntBASIC18.25■□□□□ 0.51
LINC01560Q8TB33 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms