Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 AC093323.1-202ENST00000635031 2045 ntBASIC16.48■□□□□ 0.23
LINC01006Q8NI28 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LINC01006Q8NI28 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.47■□□□□ 0.23
LINC01006Q8NI28 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.47■□□□□ 0.23
LINC01006Q8NI28 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01006Q8NI28 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 LSM12P1-201ENST00000411836 588 ntBASIC16.46■□□□□ 0.23
LINC01006Q8NI28 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 RPS2P52-201ENST00000469610 820 ntBASIC16.46■□□□□ 0.23
LINC01006Q8NI28 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 AC092053.2-201ENST00000640557 1818 ntBASIC16.46■□□□□ 0.23
LINC01006Q8NI28 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01006Q8NI28 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LINC01006Q8NI28 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.46■□□□□ 0.22
LINC01006Q8NI28 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 AC098590.1-201ENST00000468126 897 ntBASIC16.45■□□□□ 0.22
LINC01006Q8NI28 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01006Q8NI28 AC006058.3-201ENST00000606217 1069 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms