Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AL050303.2-201ENST00000619798 666 ntBASIC23.88■■□□□ 1.41
RETREG2Q8NC44 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG2Q8NC44 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 AP004607.7-201ENST00000527152 1677 ntBASIC23.87■■□□□ 1.41
RETREG2Q8NC44 AL034346.1-201ENST00000568244 1277 ntBASIC23.87■■□□□ 1.41
RETREG2Q8NC44 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.87■■□□□ 1.41
RETREG2Q8NC44 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 SLC29A4P1-201ENST00000398760 971 ntBASIC23.86■■□□□ 1.41
RETREG2Q8NC44 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 UBE2DNL-204ENST00000602536 740 ntBASIC23.86■■□□□ 1.41
RETREG2Q8NC44 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.86■■□□□ 1.41
RETREG2Q8NC44 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 TSPY20P-201ENST00000450910 630 ntBASIC23.85■■□□□ 1.41
RETREG2Q8NC44 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG2Q8NC44 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 AP001160.3-201ENST00000601484 763 ntBASIC23.84■■□□□ 1.41
RETREG2Q8NC44 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG2Q8NC44 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 KRT18P6-201ENST00000555540 1265 ntBASIC23.83■■□□□ 1.41
RETREG2Q8NC44 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.83■■□□□ 1.41
RETREG2Q8NC44 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
RETREG2Q8NC44 FBXW4P1-201ENST00000426721 2239 ntBASIC23.83■■□□□ 1.4
RETREG2Q8NC44 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 SLC7A5P2-201ENST00000553010 536 ntBASIC23.82■■□□□ 1.4
RETREG2Q8NC44 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 MYCNOS-205ENST00000641950 531 ntBASIC23.82■■□□□ 1.4
RETREG2Q8NC44 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG2Q8NC44 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms