Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 AC092437.1-201ENST00000624794 1048 ntBASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRAM1L1Q8N609 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
TRAM1L1Q8N609 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
TRAM1L1Q8N609 AC061975.6-201ENST00000579045 1553 ntBASIC20.89■□□□□ 0.94
TRAM1L1Q8N609 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.89■□□□□ 0.94
TRAM1L1Q8N609 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRAM1L1Q8N609 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAM1L1Q8N609 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 UBE2DNL-204ENST00000602536 740 ntBASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAM1L1Q8N609 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 SLC7A5P2-201ENST00000553010 536 ntBASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 SLC7A5P1-201ENST00000568957 537 ntBASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
TRAM1L1Q8N609 KRT16P2-201ENST00000414673 1423 ntBASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 AL137784.2-201ENST00000607332 1000 ntBASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 MYCNOS-205ENST00000641950 531 ntBASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 LINC00565-201ENST00000562710 2331 ntBASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRAM1L1Q8N609 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAM1L1Q8N609 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAM1L1Q8N609 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms