Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.23■■□□□ 1.95
PROM2Q8N271 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.23■■□□□ 1.95
PROM2Q8N271 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC27.23■■□□□ 1.95
PROM2Q8N271 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC27.23■■□□□ 1.95
PROM2Q8N271 SLC29A4P2-201ENST00000504749 1089 ntBASIC27.23■■□□□ 1.95
PROM2Q8N271 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC27.23■■□□□ 1.95
PROM2Q8N271 AC097493.4-201ENST00000641197 219 ntBASIC27.23■■□□□ 1.95
PROM2Q8N271 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PROM2Q8N271 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PROM2Q8N271 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PROM2Q8N271 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PROM2Q8N271 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.22■■□□□ 1.95
PROM2Q8N271 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.22■■□□□ 1.95
PROM2Q8N271 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PROM2Q8N271 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PROM2Q8N271 RPS2P55-201ENST00000397318 883 ntBASIC27.22■■□□□ 1.95
PROM2Q8N271 AC087499.1-201ENST00000418141 1075 ntBASIC27.22■■□□□ 1.95
PROM2Q8N271 AC107956.1-201ENST00000494359 873 ntBASIC27.22■■□□□ 1.95
PROM2Q8N271 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.22■■□□□ 1.95
PROM2Q8N271 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.22■■□□□ 1.95
PROM2Q8N271 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.22■■□□□ 1.95
PROM2Q8N271 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
PROM2Q8N271 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PROM2Q8N271 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.21■■□□□ 1.95
PROM2Q8N271 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PROM2Q8N271 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC27.21■■□□□ 1.95
PROM2Q8N271 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PROM2Q8N271 AC012618.2-201ENST00000428058 849 ntBASIC27.21■■□□□ 1.95
PROM2Q8N271 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC27.21■■□□□ 1.95
PROM2Q8N271 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.21■■□□□ 1.95
PROM2Q8N271 AL034346.1-201ENST00000568244 1277 ntBASIC27.21■■□□□ 1.95
PROM2Q8N271 AC079416.2-201ENST00000625035 1193 ntBASIC27.21■■□□□ 1.95
PROM2Q8N271 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
PROM2Q8N271 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PROM2Q8N271 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PROM2Q8N271 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.95
PROM2Q8N271 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
PROM2Q8N271 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.2■■□□□ 1.95
PROM2Q8N271 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC27.2■■□□□ 1.94
PROM2Q8N271 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC27.2■■□□□ 1.94
PROM2Q8N271 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.2■■□□□ 1.94
PROM2Q8N271 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.2■■□□□ 1.94
PROM2Q8N271 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PROM2Q8N271 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
PROM2Q8N271 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.19■■□□□ 1.94
PROM2Q8N271 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PROM2Q8N271 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC27.19■■□□□ 1.94
PROM2Q8N271 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PROM2Q8N271 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
PROM2Q8N271 LINC01960-201ENST00000563759 1884 ntBASIC27.19■■□□□ 1.94
PROM2Q8N271 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
PROM2Q8N271 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.18■■□□□ 1.94
PROM2Q8N271 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PROM2Q8N271 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.18■■□□□ 1.94
PROM2Q8N271 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PROM2Q8N271 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PROM2Q8N271 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC27.18■■□□□ 1.94
PROM2Q8N271 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC27.18■■□□□ 1.94
PROM2Q8N271 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC27.18■■□□□ 1.94
PROM2Q8N271 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC27.18■■□□□ 1.94
PROM2Q8N271 AC092368.3-202ENST00000574180 1591 ntBASIC27.18■■□□□ 1.94
PROM2Q8N271 KRT17P2-201ENST00000300992 1314 ntBASIC27.17■■□□□ 1.94
PROM2Q8N271 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PROM2Q8N271 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PROM2Q8N271 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
PROM2Q8N271 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PROM2Q8N271 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PROM2Q8N271 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.17■■□□□ 1.94
PROM2Q8N271 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PROM2Q8N271 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC27.17■■□□□ 1.94
PROM2Q8N271 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PROM2Q8N271 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
PROM2Q8N271 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PROM2Q8N271 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PROM2Q8N271 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PROM2Q8N271 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PROM2Q8N271 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
PROM2Q8N271 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC27.16■■□□□ 1.94
PROM2Q8N271 KLF2-202ENST00000592003 564 ntTSL 3 BASIC27.16■■□□□ 1.94
PROM2Q8N271 AC061975.6-201ENST00000579045 1553 ntBASIC27.16■■□□□ 1.94
PROM2Q8N271 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PROM2Q8N271 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
PROM2Q8N271 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PROM2Q8N271 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
PROM2Q8N271 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PROM2Q8N271 ISG20-202ENST00000379224 540 ntTSL 3 BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms