Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 CCDC92B-201ENST00000575506 885 ntBASIC19.72■□□□□ 0.75
CCDC71Q8IV32 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.72■□□□□ 0.75
CCDC71Q8IV32 AC004687.1-201ENST00000579003 1625 ntBASIC19.72■□□□□ 0.75
CCDC71Q8IV32 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 OR2I1P-207ENST00000453522 948 ntBASIC19.71■□□□□ 0.75
CCDC71Q8IV32 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 AC092437.1-201ENST00000624794 1048 ntBASIC19.71■□□□□ 0.75
CCDC71Q8IV32 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71Q8IV32 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.7■□□□□ 0.74
CCDC71Q8IV32 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71Q8IV32 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 AC004911.1-201ENST00000416316 871 ntBASIC19.69■□□□□ 0.74
CCDC71Q8IV32 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71Q8IV32 AC026471.6-201ENST00000622954 1905 ntBASIC19.68■□□□□ 0.74
CCDC71Q8IV32 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC71Q8IV32 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms