Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RSPH3Q86UC2 RBM17P2-201ENST00000616397 1405 ntBASIC23.25■■□□□ 1.31
RSPH3Q86UC2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 FAM201B-201ENST00000458407 597 ntBASIC23.24■■□□□ 1.31
RSPH3Q86UC2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 AC098934.4-201ENST00000564127 592 ntBASIC23.24■■□□□ 1.31
RSPH3Q86UC2 AC243732.1-201ENST00000612648 864 ntBASIC23.24■■□□□ 1.31
RSPH3Q86UC2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.24■■□□□ 1.31
RSPH3Q86UC2 AC092053.2-201ENST00000640557 1818 ntBASIC23.24■■□□□ 1.31
RSPH3Q86UC2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.23■■□□□ 1.31
RSPH3Q86UC2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RSPH3Q86UC2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 AC093787.1-201ENST00000450396 207 ntBASIC23.22■■□□□ 1.31
RSPH3Q86UC2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 AC092118.2-201ENST00000613495 667 ntBASIC23.22■■□□□ 1.31
RSPH3Q86UC2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 AC003102.1-202ENST00000563394 1796 ntBASIC23.22■■□□□ 1.31
RSPH3Q86UC2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RSPH3Q86UC2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RSPH3Q86UC2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RSPH3Q86UC2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.21■■□□□ 1.31
RSPH3Q86UC2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.21■■□□□ 1.31
RSPH3Q86UC2 AC061975.6-201ENST00000579045 1553 ntBASIC23.21■■□□□ 1.31
RSPH3Q86UC2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RSPH3Q86UC2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.21■■□□□ 1.31
RSPH3Q86UC2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RSPH3Q86UC2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 BX276092.2-201ENST00000417668 665 ntBASIC23.2■■□□□ 1.3
RSPH3Q86UC2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RSPH3Q86UC2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms