Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SCXQ7RTU7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SCXQ7RTU7 BX005040.4-201ENST00000637145 1518 ntBASIC13.85□□□□□ -0.19
SCXQ7RTU7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC13.84□□□□□ -0.19
SCXQ7RTU7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCXQ7RTU7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC13.83□□□□□ -0.19
SCXQ7RTU7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCXQ7RTU7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
SCXQ7RTU7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 AL121603.2-201ENST00000557373 2117 ntBASIC13.83□□□□□ -0.2
SCXQ7RTU7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SCXQ7RTU7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCXQ7RTU7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 AC016769.1-201ENST00000409132 1010 ntBASIC13.82□□□□□ -0.2
SCXQ7RTU7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 KRT18P61-201ENST00000585825 1298 ntBASIC13.82□□□□□ -0.2
SCXQ7RTU7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCXQ7RTU7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SCXQ7RTU7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 AC137761.2-201ENST00000561729 223 ntBASIC13.81□□□□□ -0.2
SCXQ7RTU7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 AC145350.3-201ENST00000569033 163 ntBASIC13.81□□□□□ -0.2
SCXQ7RTU7 SMUG1P1-201ENST00000590640 811 ntBASIC13.81□□□□□ -0.2
SCXQ7RTU7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCXQ7RTU7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SCXQ7RTU7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms