Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.65■□□□□ 0.26
FAM78BQ5VT40 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 AL499627.2-201ENST00000606283 725 ntBASIC16.65■□□□□ 0.26
FAM78BQ5VT40 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 OXCT2P1-201ENST00000447263 1535 ntBASIC16.65■□□□□ 0.26
FAM78BQ5VT40 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
FAM78BQ5VT40 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 OR7E47P-201ENST00000546390 1422 ntBASIC16.64■□□□□ 0.25
FAM78BQ5VT40 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM78BQ5VT40 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 UNC93B8-201ENST00000511903 705 ntBASIC16.63■□□□□ 0.25
FAM78BQ5VT40 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM78BQ5VT40 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.62■□□□□ 0.25
FAM78BQ5VT40 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM78BQ5VT40 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM78BQ5VT40 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms