Protein–RNA interactions for Protein: Q5PRF9

SAMD4B, Protein Smaug homolog 2, humanhuman

Known RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4BQ5PRF9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.03■□□□□ 0.8
SAMD4BQ5PRF9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SAMD4BQ5PRF9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SAMD4BQ5PRF9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SAMD4BQ5PRF9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SAMD4BQ5PRF9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 AC010141.3-201ENST00000456659 717 ntBASIC20■□□□□ 0.79
SAMD4BQ5PRF9 KRT125P-201ENST00000546827 989 ntBASIC20■□□□□ 0.79
SAMD4BQ5PRF9 pRNA.6-201ENST00000610482 90 ntBASIC20■□□□□ 0.79
SAMD4BQ5PRF9 pRNA.5-201ENST00000612139 90 ntBASIC20■□□□□ 0.79
SAMD4BQ5PRF9 pRNA.11-201ENST00000618423 90 ntBASIC20■□□□□ 0.79
SAMD4BQ5PRF9 pRNA.13-201ENST00000619112 90 ntBASIC20■□□□□ 0.79
SAMD4BQ5PRF9 AL117332.1-201ENST00000622628 974 ntBASIC20■□□□□ 0.79
SAMD4BQ5PRF9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SAMD4BQ5PRF9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 PLK5-205ENST00000642079 1969 ntBASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 AC012354.3-201ENST00000623734 483 ntBASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SAMD4BQ5PRF9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 AC010997.5-201ENST00000609182 354 ntBASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SAMD4BQ5PRF9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms