Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 KRT87P-202ENST00000534226 1464 ntBASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTSL3PQ5NE16 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 CCDC92B-201ENST00000575506 885 ntBASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.8■□□□□ 0.92
CTSL3PQ5NE16 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTSL3PQ5NE16 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTSL3PQ5NE16 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.77■□□□□ 0.92
CTSL3PQ5NE16 AL049796.1-201ENST00000565336 1766 ntBASIC20.77■□□□□ 0.91
CTSL3PQ5NE16 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTSL3PQ5NE16 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 KRT18P14-201ENST00000534205 1250 ntBASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTSL3PQ5NE16 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSL3PQ5NE16 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CTSL3PQ5NE16 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTSL3PQ5NE16 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTSL3PQ5NE16 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CTSL3PQ5NE16 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.75■□□□□ 0.91
CTSL3PQ5NE16 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms