Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRFAM7AQ494W8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 AC016769.1-201ENST00000409132 1010 ntBASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CHRFAM7AQ494W8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRFAM7AQ494W8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRFAM7AQ494W8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRFAM7AQ494W8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRFAM7AQ494W8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRFAM7AQ494W8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRFAM7AQ494W8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRFAM7AQ494W8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 AC244015.2-201ENST00000616358 1861 ntBASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRFAM7AQ494W8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRFAM7AQ494W8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms