Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1EQ15878 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1EQ15878 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CACNA1EQ15878 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.7■□□□□ 0.9
CACNA1EQ15878 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1EQ15878 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1EQ15878 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1EQ15878 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1EQ15878 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1EQ15878 AC139530.1-201ENST00000575312 1977 ntBASIC20.69■□□□□ 0.9
CACNA1EQ15878 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1EQ15878 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CACNA1EQ15878 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1EQ15878 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1EQ15878 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1EQ15878 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1EQ15878 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1EQ15878 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1EQ15878 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA1EQ15878 AL355472.2-201ENST00000422958 438 ntBASIC20.68■□□□□ 0.9
CACNA1EQ15878 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CACNA1EQ15878 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CACNA1EQ15878 AC073648.6-201ENST00000641589 218 ntBASIC20.68■□□□□ 0.9
CACNA1EQ15878 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CACNA1EQ15878 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1EQ15878 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1EQ15878 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.67■□□□□ 0.9
CACNA1EQ15878 ECEL1P3-201ENST00000427961 737 ntBASIC20.67■□□□□ 0.9
CACNA1EQ15878 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNA1EQ15878 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNA1EQ15878 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1EQ15878 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNA1EQ15878 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1EQ15878 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1EQ15878 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1EQ15878 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1EQ15878 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.67■□□□□ 0.9
CACNA1EQ15878 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.67■□□□□ 0.9
CACNA1EQ15878 KRT17P1-201ENST00000399211 1546 ntBASIC20.67■□□□□ 0.9
CACNA1EQ15878 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
CACNA1EQ15878 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CACNA1EQ15878 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1EQ15878 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1EQ15878 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1EQ15878 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1EQ15878 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1EQ15878 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1EQ15878 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNA1EQ15878 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.66■□□□□ 0.9
CACNA1EQ15878 AC008403.3-201ENST00000598924 454 ntBASIC20.66■□□□□ 0.9
CACNA1EQ15878 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1EQ15878 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNA1EQ15878 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.66■□□□□ 0.9
CACNA1EQ15878 AC061975.6-201ENST00000579045 1553 ntBASIC20.66■□□□□ 0.9
CACNA1EQ15878 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA1EQ15878 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA1EQ15878 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA1EQ15878 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1EQ15878 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CACNA1EQ15878 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA1EQ15878 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
CACNA1EQ15878 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.64■□□□□ 0.89
CACNA1EQ15878 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.64■□□□□ 0.89
CACNA1EQ15878 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
CACNA1EQ15878 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNA1EQ15878 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 AC100791.3-201ENST00000617619 330 ntBASIC20.64■□□□□ 0.89
CACNA1EQ15878 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1EQ15878 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1EQ15878 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.63■□□□□ 0.89
CACNA1EQ15878 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1EQ15878 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1EQ15878 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms