Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.01■□□□□ 0.47
EFNB3Q15768 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.01■□□□□ 0.47
EFNB3Q15768 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.01■□□□□ 0.47
EFNB3Q15768 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
EFNB3Q15768 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
EFNB3Q15768 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EFNB3Q15768 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFNB3Q15768 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18■□□□□ 0.47
EFNB3Q15768 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18■□□□□ 0.47
EFNB3Q15768 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18■□□□□ 0.47
EFNB3Q15768 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFNB3Q15768 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
EFNB3Q15768 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18■□□□□ 0.47
EFNB3Q15768 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18■□□□□ 0.47
EFNB3Q15768 AC007322.4-201ENST00000509611 723 ntBASIC18■□□□□ 0.47
EFNB3Q15768 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
EFNB3Q15768 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18■□□□□ 0.47
EFNB3Q15768 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFNB3Q15768 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
EFNB3Q15768 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18■□□□□ 0.47
EFNB3Q15768 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18■□□□□ 0.47
EFNB3Q15768 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFNB3Q15768 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
EFNB3Q15768 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 GPX1P1-201ENST00000388829 606 ntBASIC17.99■□□□□ 0.47
EFNB3Q15768 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.99■□□□□ 0.47
EFNB3Q15768 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 AC104771.1-201ENST00000603335 964 ntBASIC17.99■□□□□ 0.47
EFNB3Q15768 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
EFNB3Q15768 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.99■□□□□ 0.47
EFNB3Q15768 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EFNB3Q15768 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.99■□□□□ 0.47
EFNB3Q15768 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.99■□□□□ 0.47
EFNB3Q15768 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.99■□□□□ 0.47
EFNB3Q15768 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFNB3Q15768 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
EFNB3Q15768 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
EFNB3Q15768 AC242852.2-201ENST00000615738 1807 ntBASIC17.98■□□□□ 0.47
EFNB3Q15768 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 EP400NL-214ENST00000641289 2402 ntBASIC17.98■□□□□ 0.47
EFNB3Q15768 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
EFNB3Q15768 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
EFNB3Q15768 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.98■□□□□ 0.47
EFNB3Q15768 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 AL121832.2-201ENST00000610979 668 ntBASIC17.98■□□□□ 0.47
EFNB3Q15768 AL109923.1-201ENST00000618799 583 ntBASIC17.98■□□□□ 0.47
EFNB3Q15768 AL050303.2-201ENST00000619798 666 ntBASIC17.98■□□□□ 0.47
EFNB3Q15768 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
EFNB3Q15768 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
EFNB3Q15768 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.98■□□□□ 0.47
EFNB3Q15768 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFNB3Q15768 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.97■□□□□ 0.47
EFNB3Q15768 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
EFNB3Q15768 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.97■□□□□ 0.47
EFNB3Q15768 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
EFNB3Q15768 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFNB3Q15768 FAM99A-202ENST00000538190 1989 ntBASIC17.97■□□□□ 0.47
EFNB3Q15768 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
EFNB3Q15768 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFNB3Q15768 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.96■□□□□ 0.47
EFNB3Q15768 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.96■□□□□ 0.47
EFNB3Q15768 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms