Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 STE14YDR410C 720 nt3.39□□□□□ -1.87
VPS38Q05919 YEL050W-AYEL050W-A 192 nt3.39□□□□□ -1.87
VPS38Q05919 tK(UUU)DtK(UUU)D 73 nt3.39□□□□□ -1.87
VPS38Q05919 tK(UUU)G1tK(UUU)G1 73 nt3.39□□□□□ -1.87
VPS38Q05919 tK(UUU)G2tK(UUU)G2 73 nt3.39□□□□□ -1.87
VPS38Q05919 tK(UUU)KtK(UUU)K 73 nt3.39□□□□□ -1.87
VPS38Q05919 tK(UUU)LtK(UUU)L 73 nt3.39□□□□□ -1.87
VPS38Q05919 tK(UUU)OtK(UUU)O 73 nt3.39□□□□□ -1.87
VPS38Q05919 tK(UUU)PtK(UUU)P 73 nt3.39□□□□□ -1.87
VPS38Q05919 tQ(UUG)BtQ(UUG)B 72 nt3.39□□□□□ -1.87
VPS38Q05919 PAU13YHL046C 363 nt3.39□□□□□ -1.87
VPS38Q05919 DLS1YJL065C 504 nt3.39□□□□□ -1.87
VPS38Q05919 LSM1YJL124C 519 nt3.39□□□□□ -1.87
VPS38Q05919 LIP2YLR239C 987 nt3.39□□□□□ -1.87
VPS38Q05919 NDL1YLR254C 570 nt3.39□□□□□ -1.87
VPS38Q05919 YLR400WYLR400W 474 nt3.39□□□□□ -1.87
VPS38Q05919 YBR090CYBR090C 369 nt3.39□□□□□ -1.87
VPS38Q05919 YBR287WYBR287W 1284 nt3.39□□□□□ -1.87
VPS38Q05919 ATP25YMR098C 1839 nt3.39□□□□□ -1.87
VPS38Q05919 PSY4YBL046W 1326 nt3.39□□□□□ -1.87
VPS38Q05919 IRC3YDR332W 2070 nt3.39□□□□□ -1.87
VPS38Q05919 CDC40YDR364C 1368 nt3.38□□□□□ -1.87
VPS38Q05919 YJL049WYJL049W 1353 nt3.38□□□□□ -1.87
VPS38Q05919 SET1YHR119W 3243 nt3.38□□□□□ -1.87
VPS38Q05919 JJJ1YNL227C 1773 nt3.38□□□□□ -1.87
VPS38Q05919 RAD5YLR032W 3510 nt3.38□□□□□ -1.87
VPS38Q05919 BSC1YDL037C 987 nt3.38□□□□□ -1.87
VPS38Q05919 STE2YFL026W 1296 nt3.38□□□□□ -1.87
VPS38Q05919 YHL002C-AYHL002C-A 489 nt3.38□□□□□ -1.87
VPS38Q05919 RPA12YJR063W 378 nt3.38□□□□□ -1.87
VPS38Q05919 SAS5YOR213C 747 nt3.38□□□□□ -1.87
VPS38Q05919 SPR2YOR214C 711 nt3.38□□□□□ -1.87
VPS38Q05919 MGE1YOR232W 687 nt3.38□□□□□ -1.87
VPS38Q05919 YPR077CYPR077C 372 nt3.38□□□□□ -1.87
VPS38Q05919 YBR201C-AYBR201C-A 204 nt3.38□□□□□ -1.87
VPS38Q05919 VPS17YOR132W 1656 nt3.38□□□□□ -1.87
VPS38Q05919 VPS38YLR360W 1320 nt3.38□□□□□ -1.87
VPS38Q05919 NGG1YDR176W 2109 nt3.37□□□□□ -1.87
VPS38Q05919 SMT3YDR510W 306 nt3.37□□□□□ -1.87
VPS38Q05919 VFA1YER128W 612 nt3.37□□□□□ -1.87
VPS38Q05919 DGA1YOR245C 1257 nt3.37□□□□□ -1.87
VPS38Q05919 SRL1YOR247W 633 nt3.37□□□□□ -1.87
VPS38Q05919 ARL1YBR164C 552 nt3.37□□□□□ -1.87
VPS38Q05919 DPB3YBR278W 606 nt3.37□□□□□ -1.87
VPS38Q05919 YBP2YGL060W 1926 nt3.36□□□□□ -1.87
VPS38Q05919 MDM1YML104C 3384 nt3.36□□□□□ -1.87
VPS38Q05919 NKP1YDR383C 717 nt3.36□□□□□ -1.87
VPS38Q05919 YGL152CYGL152C 678 nt3.36□□□□□ -1.87
VPS38Q05919 MRPL9YGR220C 810 nt3.36□□□□□ -1.87
VPS38Q05919 YJL114WYJL114W 681 nt3.36□□□□□ -1.87
VPS38Q05919 AIM26YKL037W 357 nt3.36□□□□□ -1.87
VPS38Q05919 RPC37YKR025W 849 nt3.36□□□□□ -1.87
VPS38Q05919 YLR050CYLR050C 486 nt3.36□□□□□ -1.87
VPS38Q05919 YSF3YNL138W-A 258 nt3.36□□□□□ -1.87
VPS38Q05919 TSR4YOL022C 1227 nt3.36□□□□□ -1.87
VPS38Q05919 VAM10YOR068C 345 nt3.36□□□□□ -1.87
VPS38Q05919 SME1YOR159C 285 nt3.36□□□□□ -1.87
VPS38Q05919 HUT1YPL244C 1020 nt3.36□□□□□ -1.87
VPS38Q05919 APD1YBR151W 951 nt3.36□□□□□ -1.87
VPS38Q05919 SKN7YHR206W 1869 nt3.36□□□□□ -1.87
VPS38Q05919 TRM82YDR165W 1335 nt3.36□□□□□ -1.87
VPS38Q05919 YGR237CYGR237C 2358 nt3.36□□□□□ -1.87
VPS38Q05919 CST9YLR394W 1449 nt3.36□□□□□ -1.87
VPS38Q05919 BEM4YPL161C 1902 nt3.35□□□□□ -1.87
VPS38Q05919 SRP1YNL189W 1629 nt3.35□□□□□ -1.87
VPS38Q05919 PEX6YNL329C 3093 nt3.35□□□□□ -1.87
VPS38Q05919 GPM2YDL021W 936 nt3.35□□□□□ -1.87
VPS38Q05919 NRG1YDR043C 696 nt3.35□□□□□ -1.87
VPS38Q05919 YFH7YFR007W 1062 nt3.35□□□□□ -1.87
VPS38Q05919 SUB1YMR039C 879 nt3.35□□□□□ -1.87
VPS38Q05919 FAR3YMR052W 615 nt3.35□□□□□ -1.87
VPS38Q05919 YOL107WYOL107W 1029 nt3.35□□□□□ -1.87
VPS38Q05919 RPL20BYOR312C 519 nt3.35□□□□□ -1.87
VPS38Q05919 NMD2YHR077C 3270 nt3.35□□□□□ -1.87
VPS38Q05919 RPN1YHR027C 2982 nt3.35□□□□□ -1.87
VPS38Q05919 SQS1YNL224C 2304 nt3.35□□□□□ -1.87
VPS38Q05919 URK1YNR012W 1506 nt3.34□□□□□ -1.87
VPS38Q05919 ATG26YLR189C 3597 nt3.34□□□□□ -1.87
VPS38Q05919 OPI6YDL096C 327 nt3.34□□□□□ -1.87
VPS38Q05919 YPR1YDR368W 939 nt3.34□□□□□ -1.87
VPS38Q05919 YEA4YEL004W 1029 nt3.34□□□□□ -1.87
VPS38Q05919 FMP32YFL046W 624 nt3.34□□□□□ -1.87
VPS38Q05919 CDC26YFR036W 375 nt3.34□□□□□ -1.87
VPS38Q05919 YGR039WYGR039W 312 nt3.34□□□□□ -1.87
VPS38Q05919 PHD1YKL043W 1101 nt3.34□□□□□ -1.87
VPS38Q05919 YKL156C-AYKL156C-A 117 nt3.34□□□□□ -1.87
VPS38Q05919 YLR217WYLR217W 324 nt3.34□□□□□ -1.87
VPS38Q05919 PEX11YOL147C 711 nt3.34□□□□□ -1.87
VPS38Q05919 PEX27YOR193W 1131 nt3.34□□□□□ -1.87
VPS38Q05919 CBP6YBR120C 489 nt3.34□□□□□ -1.87
VPS38Q05919 PHO81YGR233C 3537 nt3.33□□□□□ -1.88
VPS38Q05919 LRG1YDL240W 3054 nt3.33□□□□□ -1.88
VPS38Q05919 UBP5YER144C 2418 nt3.33□□□□□ -1.88
VPS38Q05919 FKH2YNL068C 2589 nt3.33□□□□□ -1.88
VPS38Q05919 YHL048C-AYHL048C-A 135 nt3.33□□□□□ -1.88
VPS38Q05919 GTT2YLL060C 702 nt3.33□□□□□ -1.88
VPS38Q05919 snR189snR189 189 nt3.33□□□□□ -1.88
VPS38Q05919 YPR053CYPR053C 456 nt3.33□□□□□ -1.88
VPS38Q05919 YDR170W-AYDR170W-A 1323 nt3.33□□□□□ -1.88
VPS38Q05919 ERG9YHR190W 1335 nt3.33□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms