Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC026366.1-201ENST00000488803 879 ntBASIC20.1■□□□□ 0.81
GABREP78334 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
GABREP78334 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.1■□□□□ 0.81
GABREP78334 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.1■□□□□ 0.81
GABREP78334 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.1■□□□□ 0.81
GABREP78334 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 RBM17P2-201ENST00000616397 1405 ntBASIC20.1■□□□□ 0.81
GABREP78334 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.09■□□□□ 0.81
GABREP78334 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.09■□□□□ 0.81
GABREP78334 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.09■□□□□ 0.81
GABREP78334 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.09■□□□□ 0.81
GABREP78334 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.09■□□□□ 0.81
GABREP78334 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.09■□□□□ 0.81
GABREP78334 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.09■□□□□ 0.81
GABREP78334 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
GABREP78334 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 KRT16P2-201ENST00000414673 1423 ntBASIC20.09■□□□□ 0.81
GABREP78334 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.09■□□□□ 0.81
GABREP78334 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
GABREP78334 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GABREP78334 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.08■□□□□ 0.81
GABREP78334 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABREP78334 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
GABREP78334 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.08■□□□□ 0.81
GABREP78334 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABREP78334 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABREP78334 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABREP78334 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABREP78334 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
GABREP78334 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GABREP78334 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.08■□□□□ 0.81
GABREP78334 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.08■□□□□ 0.81
GABREP78334 UNC93B5-201ENST00000530315 699 ntBASIC20.08■□□□□ 0.81
GABREP78334 AP003097.1-201ENST00000530657 1135 ntBASIC20.08■□□□□ 0.81
GABREP78334 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.08■□□□□ 0.81
GABREP78334 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
GABREP78334 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GABREP78334 AC073648.6-201ENST00000641589 218 ntBASIC20.08■□□□□ 0.81
GABREP78334 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
GABREP78334 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GABREP78334 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
GABREP78334 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
GABREP78334 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.07■□□□□ 0.8
GABREP78334 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 LSM12P1-201ENST00000411836 588 ntBASIC20.07■□□□□ 0.8
GABREP78334 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
GABREP78334 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.07■□□□□ 0.8
GABREP78334 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.07■□□□□ 0.8
GABREP78334 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.07■□□□□ 0.8
GABREP78334 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.07■□□□□ 0.8
GABREP78334 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.07■□□□□ 0.8
GABREP78334 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GABREP78334 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABREP78334 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GABREP78334 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.06■□□□□ 0.8
GABREP78334 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.06■□□□□ 0.8
GABREP78334 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.06■□□□□ 0.8
GABREP78334 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.06■□□□□ 0.8
GABREP78334 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GABREP78334 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.06■□□□□ 0.8
GABREP78334 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GABREP78334 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.06■□□□□ 0.8
GABREP78334 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABREP78334 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GABREP78334 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GABREP78334 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
GABREP78334 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GABREP78334 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.05■□□□□ 0.8
GABREP78334 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GABREP78334 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.05■□□□□ 0.8
GABREP78334 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GABREP78334 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GABREP78334 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms