Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
CLDN2P57739 AC010542.4-201ENST00000563151 1910 ntBASIC20.88■□□□□ 0.93
CLDN2P57739 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CLDN2P57739 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN2P57739 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLDN2P57739 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN2P57739 AC098934.4-201ENST00000564127 592 ntBASIC20.88■□□□□ 0.93
CLDN2P57739 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN2P57739 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CLDN2P57739 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.88■□□□□ 0.93
CLDN2P57739 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN2P57739 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.88■□□□□ 0.93
CLDN2P57739 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN2P57739 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN2P57739 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN2P57739 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDN2P57739 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN2P57739 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN2P57739 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN2P57739 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN2P57739 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN2P57739 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.87■□□□□ 0.93
CLDN2P57739 AC007322.4-201ENST00000509611 723 ntBASIC20.87■□□□□ 0.93
CLDN2P57739 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN2P57739 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN2P57739 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.87■□□□□ 0.93
CLDN2P57739 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN2P57739 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.87■□□□□ 0.93
CLDN2P57739 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN2P57739 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN2P57739 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN2P57739 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN2P57739 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN2P57739 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
CLDN2P57739 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN2P57739 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN2P57739 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN2P57739 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.86■□□□□ 0.93
CLDN2P57739 AC016405.3-201ENST00000607710 860 ntBASIC20.86■□□□□ 0.93
CLDN2P57739 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN2P57739 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN2P57739 KRT16P2-201ENST00000414673 1423 ntBASIC20.86■□□□□ 0.93
CLDN2P57739 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CLDN2P57739 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.85■□□□□ 0.93
CLDN2P57739 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CLDN2P57739 FAM99A-202ENST00000538190 1989 ntBASIC20.85■□□□□ 0.93
CLDN2P57739 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.85■□□□□ 0.93
CLDN2P57739 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 AC093787.1-201ENST00000450396 207 ntBASIC20.85■□□□□ 0.93
CLDN2P57739 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 CD99P1-205ENST00000527459 561 ntBASIC20.85■□□□□ 0.93
CLDN2P57739 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN2P57739 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN2P57739 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN2P57739 RBM17P2-201ENST00000616397 1405 ntBASIC20.85■□□□□ 0.93
CLDN2P57739 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 ABHD17AP1-201ENST00000358206 933 ntBASIC20.84■□□□□ 0.93
CLDN2P57739 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CLDN2P57739 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN2P57739 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CLDN2P57739 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN2P57739 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.84■□□□□ 0.93
CLDN2P57739 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN2P57739 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN2P57739 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN2P57739 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.83■□□□□ 0.93
CLDN2P57739 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN2P57739 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CLDN2P57739 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN2P57739 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN2P57739 AC069152.1-201ENST00000438030 544 ntBASIC20.83■□□□□ 0.93
CLDN2P57739 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.83■□□□□ 0.93
CLDN2P57739 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.83■□□□□ 0.93
CLDN2P57739 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN2P57739 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
CLDN2P57739 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.83■□□□□ 0.93
CLDN2P57739 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.83■□□□□ 0.93
CLDN2P57739 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN2P57739 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CLDN2P57739 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.83■□□□□ 0.92
CLDN2P57739 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN2P57739 MKRN4P-201ENST00000444706 1521 ntBASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms