Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
WNT3P56703 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
WNT3P56703 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
WNT3P56703 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
WNT3P56703 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.96■□□□□ 0.79
WNT3P56703 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
WNT3P56703 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.96■□□□□ 0.79
WNT3P56703 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.96■□□□□ 0.79
WNT3P56703 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
WNT3P56703 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.96■□□□□ 0.79
WNT3P56703 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.96■□□□□ 0.79
WNT3P56703 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
WNT3P56703 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
WNT3P56703 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.96■□□□□ 0.79
WNT3P56703 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
WNT3P56703 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.96■□□□□ 0.79
WNT3P56703 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
WNT3P56703 AC055733.4-201ENST00000638462 1354 ntBASIC19.95■□□□□ 0.79
WNT3P56703 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
WNT3P56703 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.95■□□□□ 0.78
WNT3P56703 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.95■□□□□ 0.78
WNT3P56703 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.95■□□□□ 0.78
WNT3P56703 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
WNT3P56703 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
WNT3P56703 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.95■□□□□ 0.78
WNT3P56703 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.95■□□□□ 0.78
WNT3P56703 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.94■□□□□ 0.78
WNT3P56703 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
WNT3P56703 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
WNT3P56703 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.94■□□□□ 0.78
WNT3P56703 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
WNT3P56703 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
WNT3P56703 AC009237.3-201ENST00000393279 1427 ntBASIC19.93■□□□□ 0.78
WNT3P56703 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.93■□□□□ 0.78
WNT3P56703 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.93■□□□□ 0.78
WNT3P56703 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.93■□□□□ 0.78
WNT3P56703 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.93■□□□□ 0.78
WNT3P56703 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.93■□□□□ 0.78
WNT3P56703 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.93■□□□□ 0.78
WNT3P56703 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.93■□□□□ 0.78
WNT3P56703 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
WNT3P56703 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
WNT3P56703 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.92■□□□□ 0.78
WNT3P56703 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.92■□□□□ 0.78
WNT3P56703 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.92■□□□□ 0.78
WNT3P56703 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.92■□□□□ 0.78
WNT3P56703 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.92■□□□□ 0.78
WNT3P56703 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
WNT3P56703 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
WNT3P56703 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
WNT3P56703 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
WNT3P56703 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
WNT3P56703 AC073130.3-201ENST00000624389 2278 ntBASIC19.91■□□□□ 0.78
WNT3P56703 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
WNT3P56703 IRS3P-201ENST00000223076 1006 ntBASIC19.91■□□□□ 0.78
WNT3P56703 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.91■□□□□ 0.78
WNT3P56703 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.91■□□□□ 0.78
WNT3P56703 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
WNT3P56703 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms