Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP1B3P54709 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP1B3P54709 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP1B3P54709 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP1B3P54709 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP1B3P54709 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP1B3P54709 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP1B3P54709 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.23■□□□□ 0.51
ATP1B3P54709 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP1B3P54709 AC131212.1-201ENST00000613771 668 ntBASIC18.23■□□□□ 0.51
ATP1B3P54709 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP1B3P54709 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATP1B3P54709 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATP1B3P54709 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP1B3P54709 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATP1B3P54709 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
ATP1B3P54709 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP1B3P54709 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.22■□□□□ 0.51
ATP1B3P54709 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP1B3P54709 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP1B3P54709 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ATP1B3P54709 MIR4767-201ENST00000582827 78 ntBASIC18.22■□□□□ 0.51
ATP1B3P54709 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATP1B3P54709 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATP1B3P54709 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP1B3P54709 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP1B3P54709 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP1B3P54709 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP1B3P54709 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP1B3P54709 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP1B3P54709 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ATP1B3P54709 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP1B3P54709 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
ATP1B3P54709 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP1B3P54709 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP1B3P54709 AL157384.1-201ENST00000445995 2473 ntBASIC18.21■□□□□ 0.51
ATP1B3P54709 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP1B3P54709 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP1B3P54709 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP1B3P54709 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP1B3P54709 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP1B3P54709 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP1B3P54709 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP1B3P54709 AC233992.3-201ENST00000607491 485 ntBASIC18.21■□□□□ 0.51
ATP1B3P54709 AL136162.1-201ENST00000607711 1078 ntBASIC18.21■□□□□ 0.51
ATP1B3P54709 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
ATP1B3P54709 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP1B3P54709 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP1B3P54709 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.2■□□□□ 0.5
ATP1B3P54709 AC126544.1-201ENST00000580842 1059 ntBASIC18.2■□□□□ 0.5
ATP1B3P54709 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ATP1B3P54709 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP1B3P54709 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP1B3P54709 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP1B3P54709 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP1B3P54709 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP1B3P54709 FEM1AP4-201ENST00000443167 1987 ntBASIC18.19■□□□□ 0.5
ATP1B3P54709 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP1B3P54709 AC024257.2-201ENST00000549699 147 ntBASIC18.19■□□□□ 0.5
ATP1B3P54709 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP1B3P54709 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP1B3P54709 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ATP1B3P54709 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP1B3P54709 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP1B3P54709 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP1B3P54709 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP1B3P54709 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATP1B3P54709 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP1B3P54709 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 AC135279.3-201ENST00000610945 1311 ntBASIC18.18■□□□□ 0.5
ATP1B3P54709 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP1B3P54709 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP1B3P54709 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms