Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
NUP98P52948 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.54■■□□□ 1.84
NUP98P52948 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.54■■□□□ 1.84
NUP98P52948 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.54■■□□□ 1.84
NUP98P52948 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.54■■□□□ 1.84
NUP98P52948 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NUP98P52948 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
NUP98P52948 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
NUP98P52948 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
NUP98P52948 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.53■■□□□ 1.84
NUP98P52948 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.53■■□□□ 1.84
NUP98P52948 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.53■■□□□ 1.84
NUP98P52948 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.53■■□□□ 1.84
NUP98P52948 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.53■■□□□ 1.84
NUP98P52948 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.53■■□□□ 1.84
NUP98P52948 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 RPS2P52-201ENST00000469610 820 ntBASIC26.53■■□□□ 1.84
NUP98P52948 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NUP98P52948 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
NUP98P52948 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.52■■□□□ 1.84
NUP98P52948 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NUP98P52948 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NUP98P52948 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.52■■□□□ 1.84
NUP98P52948 AL355472.2-201ENST00000422958 438 ntBASIC26.52■■□□□ 1.84
NUP98P52948 AL591742.1-201ENST00000604433 565 ntBASIC26.52■■□□□ 1.84
NUP98P52948 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.52■■□□□ 1.84
NUP98P52948 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NUP98P52948 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NUP98P52948 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
NUP98P52948 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
NUP98P52948 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.51■■□□□ 1.83
NUP98P52948 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NUP98P52948 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
NUP98P52948 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.51■■□□□ 1.83
NUP98P52948 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NUP98P52948 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NUP98P52948 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NUP98P52948 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.51■■□□□ 1.83
NUP98P52948 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.51■■□□□ 1.83
NUP98P52948 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
NUP98P52948 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
NUP98P52948 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
NUP98P52948 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
NUP98P52948 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NUP98P52948 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NUP98P52948 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.5■■□□□ 1.83
NUP98P52948 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
NUP98P52948 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.5■■□□□ 1.83
NUP98P52948 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.5■■□□□ 1.83
NUP98P52948 AC010542.4-201ENST00000563151 1910 ntBASIC26.5■■□□□ 1.83
NUP98P52948 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NUP98P52948 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NUP98P52948 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
NUP98P52948 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.49■■□□□ 1.83
NUP98P52948 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.49■■□□□ 1.83
NUP98P52948 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.49■■□□□ 1.83
NUP98P52948 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
NUP98P52948 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.49■■□□□ 1.83
NUP98P52948 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.49■■□□□ 1.83
NUP98P52948 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NUP98P52948 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.49■■□□□ 1.83
NUP98P52948 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
NUP98P52948 AC092053.2-201ENST00000640557 1818 ntBASIC26.48■■□□□ 1.83
NUP98P52948 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NUP98P52948 AC097658.1-201ENST00000475555 843 ntBASIC26.48■■□□□ 1.83
NUP98P52948 UNC93B5-201ENST00000530315 699 ntBASIC26.48■■□□□ 1.83
NUP98P52948 KRT17P1-201ENST00000399211 1546 ntBASIC26.48■■□□□ 1.83
NUP98P52948 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NUP98P52948 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.47■■□□□ 1.83
NUP98P52948 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.47■■□□□ 1.83
NUP98P52948 C1orf229-201ENST00000623686 2258 ntBASIC26.47■■□□□ 1.83
NUP98P52948 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.47■■□□□ 1.83
NUP98P52948 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
NUP98P52948 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
NUP98P52948 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.47■■□□□ 1.83
NUP98P52948 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.47■■□□□ 1.83
NUP98P52948 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.47■■□□□ 1.83
NUP98P52948 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NUP98P52948 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NUP98P52948 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NUP98P52948 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.47■■□□□ 1.83
NUP98P52948 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.47■■□□□ 1.83
NUP98P52948 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
NUP98P52948 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
NUP98P52948 PRORSD1P-201ENST00000295112 541 ntBASIC26.46■■□□□ 1.83
NUP98P52948 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.46■■□□□ 1.83
NUP98P52948 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.46■■□□□ 1.83
NUP98P52948 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.46■■□□□ 1.83
NUP98P52948 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NUP98P52948 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NUP98P52948 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NUP98P52948 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NUP98P52948 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NUP98P52948 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms