Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.79■□□□□ 0.76
EFNA3P52797 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.79■□□□□ 0.76
EFNA3P52797 AL050303.2-201ENST00000619798 666 ntBASIC19.79■□□□□ 0.76
EFNA3P52797 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.79■□□□□ 0.76
EFNA3P52797 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
EFNA3P52797 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
EFNA3P52797 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNA3P52797 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
EFNA3P52797 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.78■□□□□ 0.76
EFNA3P52797 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.78■□□□□ 0.76
EFNA3P52797 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.78■□□□□ 0.76
EFNA3P52797 KRT18P20-201ENST00000548986 1279 ntBASIC19.78■□□□□ 0.76
EFNA3P52797 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.78■□□□□ 0.76
EFNA3P52797 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.78■□□□□ 0.76
EFNA3P52797 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNA3P52797 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EFNA3P52797 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNA3P52797 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNA3P52797 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.77■□□□□ 0.76
EFNA3P52797 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNA3P52797 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.77■□□□□ 0.76
EFNA3P52797 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
EFNA3P52797 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.77■□□□□ 0.76
EFNA3P52797 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.77■□□□□ 0.76
EFNA3P52797 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNA3P52797 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
EFNA3P52797 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNA3P52797 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.77■□□□□ 0.76
EFNA3P52797 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.77■□□□□ 0.76
EFNA3P52797 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
EFNA3P52797 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.76■□□□□ 0.75
EFNA3P52797 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.76■□□□□ 0.75
EFNA3P52797 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.76■□□□□ 0.75
EFNA3P52797 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
EFNA3P52797 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.76■□□□□ 0.75
EFNA3P52797 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EFNA3P52797 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
EFNA3P52797 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 C11orf96-202ENST00000528572 1834 ntBASIC19.75■□□□□ 0.75
EFNA3P52797 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.75■□□□□ 0.75
EFNA3P52797 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.75■□□□□ 0.75
EFNA3P52797 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.75■□□□□ 0.75
EFNA3P52797 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.75■□□□□ 0.75
EFNA3P52797 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.75■□□□□ 0.75
EFNA3P52797 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.75■□□□□ 0.75
EFNA3P52797 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.75■□□□□ 0.75
EFNA3P52797 AC010536.3-201ENST00000620306 533 ntBASIC19.75■□□□□ 0.75
EFNA3P52797 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
EFNA3P52797 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNA3P52797 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
EFNA3P52797 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EFNA3P52797 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EFNA3P52797 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EFNA3P52797 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.74■□□□□ 0.75
EFNA3P52797 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EFNA3P52797 MIR663A-201ENST00000385250 93 ntBASIC19.74■□□□□ 0.75
EFNA3P52797 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.74■□□□□ 0.75
EFNA3P52797 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.74■□□□□ 0.75
EFNA3P52797 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
EFNA3P52797 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EFNA3P52797 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EFNA3P52797 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms