Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.24■□□□□ 0.99
CSNK1DP48730 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
CSNK1DP48730 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
CSNK1DP48730 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.24■□□□□ 0.99
CSNK1DP48730 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.24■□□□□ 0.99
CSNK1DP48730 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.24■□□□□ 0.99
CSNK1DP48730 BID-214ENST00000617586 542 ntTSL 5 BASIC21.24■□□□□ 0.99
CSNK1DP48730 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.24■□□□□ 0.99
CSNK1DP48730 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.24■□□□□ 0.99
CSNK1DP48730 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.24■□□□□ 0.99
CSNK1DP48730 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CSNK1DP48730 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1DP48730 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1DP48730 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1DP48730 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1DP48730 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1DP48730 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CSNK1DP48730 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1DP48730 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CSNK1DP48730 AC004911.1-201ENST00000416316 871 ntBASIC21.23■□□□□ 0.99
CSNK1DP48730 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.23■□□□□ 0.99
CSNK1DP48730 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.23■□□□□ 0.99
CSNK1DP48730 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.23■□□□□ 0.99
CSNK1DP48730 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1DP48730 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.23■□□□□ 0.99
CSNK1DP48730 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.23■□□□□ 0.99
CSNK1DP48730 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CSNK1DP48730 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1DP48730 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSNK1DP48730 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.22■□□□□ 0.99
CSNK1DP48730 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSNK1DP48730 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CSNK1DP48730 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1DP48730 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.22■□□□□ 0.99
CSNK1DP48730 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.22■□□□□ 0.99
CSNK1DP48730 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1DP48730 MFSD11-216ENST00000590393 1141 ntBASIC21.22■□□□□ 0.99
CSNK1DP48730 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1DP48730 AC011767.1-201ENST00000617410 1153 ntBASIC21.22■□□□□ 0.99
CSNK1DP48730 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.22■□□□□ 0.99
CSNK1DP48730 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CSNK1DP48730 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CSNK1DP48730 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.21■□□□□ 0.99
CSNK1DP48730 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.21■□□□□ 0.99
CSNK1DP48730 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1DP48730 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1DP48730 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.21■□□□□ 0.99
CSNK1DP48730 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1DP48730 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.2■□□□□ 0.98
CSNK1DP48730 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.2■□□□□ 0.98
CSNK1DP48730 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
CSNK1DP48730 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.2■□□□□ 0.98
CSNK1DP48730 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CSNK1DP48730 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.2■□□□□ 0.98
CSNK1DP48730 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.2■□□□□ 0.98
CSNK1DP48730 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.2■□□□□ 0.98
CSNK1DP48730 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.2■□□□□ 0.98
CSNK1DP48730 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CSNK1DP48730 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.2■□□□□ 0.98
CSNK1DP48730 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1DP48730 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CSNK1DP48730 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms