Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 SOK1YDR006C 2706 nt1.76□□□□□ -2.13
VPS55P47111 CSF1YLR087C 8877 nt1.76□□□□□ -2.13
VPS55P47111 FAR11YNL127W 2862 nt1.75□□□□□ -2.13
VPS55P47111 MED1YPR070W 1701 nt1.75□□□□□ -2.13
VPS55P47111 YGR053CYGR053C 852 nt1.75□□□□□ -2.13
VPS55P47111 EFG1YGR271C-A 702 nt1.75□□□□□ -2.13
VPS55P47111 YHR137C-AYHR137C-A 651 nt1.75□□□□□ -2.13
VPS55P47111 YHR180W-AYHR180W-A 183 nt1.75□□□□□ -2.13
VPS55P47111 ERD2YBL040C 660 nt1.75□□□□□ -2.13
VPS55P47111 AAH1YNL141W 1044 nt1.75□□□□□ -2.13
VPS55P47111 RGR1YLR071C 3249 nt1.75□□□□□ -2.13
VPS55P47111 MGR3YMR115W 1506 nt1.75□□□□□ -2.13
VPS55P47111 IRC8YJL051W 2469 nt1.75□□□□□ -2.13
VPS55P47111 YOL098CYOL098C 3114 nt1.75□□□□□ -2.13
VPS55P47111 TAF2YCR042C 4224 nt1.74□□□□□ -2.13
VPS55P47111 SDT1YGL224C 843 nt1.74□□□□□ -2.13
VPS55P47111 MRPL49YJL096W 486 nt1.74□□□□□ -2.13
VPS55P47111 CPR3YML078W 549 nt1.74□□□□□ -2.13
VPS55P47111 YOR082CYOR082C 342 nt1.74□□□□□ -2.13
VPS55P47111 HAT1YPL001W 1125 nt1.74□□□□□ -2.13
VPS55P47111 INP53YOR109W 3324 nt1.74□□□□□ -2.13
VPS55P47111 GCN4YEL009C 846 nt1.73□□□□□ -2.13
VPS55P47111 RPS24AYER074W 408 nt1.73□□□□□ -2.13
VPS55P47111 BUR6YER159C 429 nt1.73□□□□□ -2.13
VPS55P47111 SPC42YKL042W 1092 nt1.73□□□□□ -2.13
VPS55P47111 VPS51YKR020W 495 nt1.73□□□□□ -2.13
VPS55P47111 PSY3YLR376C 729 nt1.73□□□□□ -2.13
VPS55P47111 YBL055CYBL055C 1257 nt1.73□□□□□ -2.13
VPS55P47111 PFY1YOR122C 381 nt1.73□□□□□ -2.13
VPS55P47111 DGK1YOR311C 873 nt1.73□□□□□ -2.13
VPS55P47111 CLN3YAL040C 1743 nt1.73□□□□□ -2.13
VPS55P47111 UTP22YGR090W 3714 nt1.73□□□□□ -2.13
VPS55P47111 SPB1YCL054W 2526 nt1.73□□□□□ -2.13
VPS55P47111 DSL1YNL258C 2265 nt1.73□□□□□ -2.13
VPS55P47111 YIG1YPL201C 1386 nt1.72□□□□□ -2.13
VPS55P47111 SIP3YNL257C 3690 nt1.72□□□□□ -2.13
VPS55P47111 YPR148CYPR148C 1308 nt1.72□□□□□ -2.13
VPS55P47111 TFC3YAL001C 3483 nt1.72□□□□□ -2.13
VPS55P47111 ATP7YKL016C 525 nt1.72□□□□□ -2.13
VPS55P47111 YLL037WYLL037W 381 nt1.72□□□□□ -2.13
VPS55P47111 YHR214C-BYHR214C-B 5382 nt1.72□□□□□ -2.13
VPS55P47111 KOG1YHR186C 4674 nt1.72□□□□□ -2.13
VPS55P47111 FBP26YJL155C 1359 nt1.72□□□□□ -2.13
VPS55P47111 UBR2YLR024C 5619 nt1.71□□□□□ -2.14
VPS55P47111 YDR132CYDR132C 1488 nt1.71□□□□□ -2.14
VPS55P47111 ERG28YER044C 447 nt1.71□□□□□ -2.14
VPS55P47111 PCL6YER059W 1263 nt1.71□□□□□ -2.14
VPS55P47111 PEA2YER149C 1263 nt1.71□□□□□ -2.14
VPS55P47111 SMX2YFL017W-A 234 nt1.71□□□□□ -2.14
VPS55P47111 SNL1YIL016W 480 nt1.71□□□□□ -2.14
VPS55P47111 RPS31YLR167W 459 nt1.71□□□□□ -2.14
VPS55P47111 HUB1YNR032C-A 222 nt1.71□□□□□ -2.14
VPS55P47111 ATG19YOL082W 1248 nt1.71□□□□□ -2.14
VPS55P47111 YOL166CYOL166C 339 nt1.71□□□□□ -2.14
VPS55P47111 SUL1YBR294W 2580 nt1.71□□□□□ -2.14
VPS55P47111 SSE1YPL106C 2082 nt1.71□□□□□ -2.14
VPS55P47111 ELG1YOR144C 2376 nt1.71□□□□□ -2.14
VPS55P47111 URK1YNR012W 1506 nt1.71□□□□□ -2.14
VPS55P47111 GAT2YMR136W 1683 nt1.71□□□□□ -2.14
VPS55P47111 RNY1YPL123C 1305 nt1.7□□□□□ -2.14
VPS55P47111 GRX2YDR513W 432 nt1.7□□□□□ -2.14
VPS55P47111 YJL052C-AYJL052C-A 120 nt1.7□□□□□ -2.14
VPS55P47111 MAK11YKL021C 1407 nt1.7□□□□□ -2.14
VPS55P47111 YMR310CYMR310C 954 nt1.7□□□□□ -2.14
VPS55P47111 ARO7YPR060C 771 nt1.7□□□□□ -2.14
VPS55P47111 USO1YDL058W 5373 nt1.7□□□□□ -2.14
VPS55P47111 YKL075CYKL075C 1353 nt1.7□□□□□ -2.14
VPS55P47111 PUT3YKL015W 2940 nt1.7□□□□□ -2.14
VPS55P47111 SPP41YDR464W 4308 nt1.7□□□□□ -2.14
VPS55P47111 MIP6YHR015W 1980 nt1.69□□□□□ -2.14
VPS55P47111 SIN4YNL236W 2925 nt1.69□□□□□ -2.14
VPS55P47111 MGM1YOR211C 2646 nt1.69□□□□□ -2.14
VPS55P47111 MRP10YDL045W-A 288 nt1.69□□□□□ -2.14
VPS55P47111 YEL057CYEL057C 702 nt1.69□□□□□ -2.14
VPS55P47111 THO1YER063W 657 nt1.69□□□□□ -2.14
VPS55P47111 SCL1YGL011C 759 nt1.69□□□□□ -2.14
VPS55P47111 CGR1YGL029W 363 nt1.69□□□□□ -2.14
VPS55P47111 UBC12YLR306W 567 nt1.69□□□□□ -2.14
VPS55P47111 YNL203CYNL203C 612 nt1.69□□□□□ -2.14
VPS55P47111 YBL081WYBL081W 1107 nt1.69□□□□□ -2.14
VPS55P47111 PNT1YOR266W 1272 nt1.69□□□□□ -2.14
VPS55P47111 MSS18YPR134W 807 nt1.69□□□□□ -2.14
VPS55P47111 ALK2YBL009W 2031 nt1.69□□□□□ -2.14
VPS55P47111 RKM4YDR257C 1485 nt1.69□□□□□ -2.14
VPS55P47111 YDL199CYDL199C 2064 nt1.68□□□□□ -2.14
VPS55P47111 AIM11YER093C-A 414 nt1.68□□□□□ -2.14
VPS55P47111 AML1YGR001C 747 nt1.68□□□□□ -2.14
VPS55P47111 MRPL25YGR076C 474 nt1.68□□□□□ -2.14
VPS55P47111 YAL059C-AYAL059C-A 423 nt1.68□□□□□ -2.14
VPS55P47111 RPS22BYLR367W 393 nt1.68□□□□□ -2.14
VPS55P47111 PNO1YOR145C 825 nt1.68□□□□□ -2.14
VPS55P47111 SHE3YBR130C 1278 nt1.68□□□□□ -2.14
VPS55P47111 MNT3YIL014W 1893 nt1.68□□□□□ -2.14
VPS55P47111 YCK2YNL154C 1641 nt1.68□□□□□ -2.14
VPS55P47111 RLI1YDR091C 1827 nt1.68□□□□□ -2.14
VPS55P47111 SPH1YLR313C 1593 nt1.68□□□□□ -2.14
VPS55P47111 VIP1YLR410W 3441 nt1.68□□□□□ -2.14
VPS55P47111 SAP185YJL098W 3177 nt1.67□□□□□ -2.14
VPS55P47111 GCN2YDR283C 4980 nt1.67□□□□□ -2.14
VPS55P47111 YBT1YLL048C 4986 nt1.67□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms