Protein–RNA interactions for Protein: P39005

KRE9, Cell wall synthesis protein KRE9, yeast

Predictions only

Length 276 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE9	P39005	YET1	YKL065C	621 nt		2.95	□□□□□ -1.94
KRE9	P39005	SWS2	YNL081C	432 nt		2.95	□□□□□ -1.94
KRE9	P39005	PHO80	YOL001W	882 nt		2.95	□□□□□ -1.94
KRE9	P39005	YOR203W	YOR203W	354 nt		2.95	□□□□□ -1.94
KRE9	P39005	RPB5	YBR154C	648 nt		2.95	□□□□□ -1.94
KRE9	P39005	GIP4	YAL031C	2283 nt		2.95	□□□□□ -1.94
KRE9	P39005	ERG11	YHR007C	1593 nt		2.95	□□□□□ -1.94
KRE9	P39005	RNA14	YMR061W	2034 nt		2.95	□□□□□ -1.94
KRE9	P39005	OAF3	YKR064W	2592 nt		2.95	□□□□□ -1.94
KRE9	P39005	PHR1	YOR386W	1698 nt		2.95	□□□□□ -1.94
KRE9	P39005	MDM30	YLR368W	1797 nt		2.95	□□□□□ -1.94
KRE9	P39005	KIN2	YLR096W	3444 nt		2.94	□□□□□ -1.94
KRE9	P39005	ATP5	YDR298C	639 nt		2.94	□□□□□ -1.94
KRE9	P39005	SLD5	YDR489W	885 nt		2.94	□□□□□ -1.94
KRE9	P39005	YGR161W-C	YGR161W-C	279 nt		2.94	□□□□□ -1.94
KRE9	P39005	ECM34	YHL043W	513 nt		2.94	□□□□□ -1.94
KRE9	P39005	RPL17B	YJL177W	555 nt		2.94	□□□□□ -1.94
KRE9	P39005	YLR406C-A	YLR406C-A	150 nt		2.94	□□□□□ -1.94
KRE9	P39005	BER1	YLR412W	825 nt		2.94	□□□□□ -1.94
KRE9	P39005	MRPL3	YMR024W	1173 nt		2.94	□□□□□ -1.94
KRE9	P39005	RPL18B	YNL301C	561 nt		2.94	□□□□□ -1.94
KRE9	P39005	PUB1	YNL016W	1362 nt		2.94	□□□□□ -1.94
KRE9	P39005	RUD3	YOR216C	1455 nt		2.94	□□□□□ -1.94
KRE9	P39005	AEP1	YMR064W	1557 nt		2.94	□□□□□ -1.94
KRE9	P39005	HUL5	YGL141W	2733 nt		2.94	□□□□□ -1.94
KRE9	P39005	YDL199C	YDL199C	2064 nt		2.94	□□□□□ -1.94
KRE9	P39005	UTP25	YIL091C	2166 nt		2.94	□□□□□ -1.94
KRE9	P39005	YNR065C	YNR065C	3351 nt		2.94	□□□□□ -1.94
KRE9	P39005	TAF12	YDR145W	1620 nt		2.93	□□□□□ -1.94
KRE9	P39005	ASI3	YNL008C	2031 nt		2.93	□□□□□ -1.94
KRE9	P39005	ACE2	YLR131C	2313 nt		2.93	□□□□□ -1.94
KRE9	P39005	MLH2	YLR035C	2088 nt		2.93	□□□□□ -1.94
KRE9	P39005	FRT2	YAL028W	1587 nt		2.93	□□□□□ -1.94
KRE9	P39005	YML096W	YML096W	1578 nt		2.93	□□□□□ -1.94
KRE9	P39005	ARP4	YJL081C	1470 nt		2.93	□□□□□ -1.94
KRE9	P39005	AIM7	YDR063W	450 nt		2.93	□□□□□ -1.94
KRE9	P39005	AGA2	YGL032C	264 nt		2.93	□□□□□ -1.94
KRE9	P39005	PRM8	YGL053W	714 nt		2.93	□□□□□ -1.94
KRE9	P39005	SAE2	YGL175C	1038 nt		2.93	□□□□□ -1.94
KRE9	P39005	YHR130C	YHR130C	336 nt		2.93	□□□□□ -1.94
KRE9	P39005	SNX4	YJL036W	1272 nt		2.93	□□□□□ -1.94
KRE9	P39005	IRC18	YJL037W	675 nt		2.93	□□□□□ -1.94
KRE9	P39005	YJL119C	YJL119C	324 nt		2.93	□□□□□ -1.94
KRE9	P39005	MRP49	YKL167C	414 nt		2.93	□□□□□ -1.94
KRE9	P39005	YMR001C-A	YMR001C-A	231 nt		2.93	□□□□□ -1.94
KRE9	P39005	YNL276C	YNL276C	396 nt		2.93	□□□□□ -1.94
KRE9	P39005	YNR034W-A	YNR034W-A	297 nt		2.93	□□□□□ -1.94
KRE9	P39005	YOR082C	YOR082C	342 nt		2.93	□□□□□ -1.94
KRE9	P39005	YPL088W	YPL088W	1029 nt		2.93	□□□□□ -1.94
KRE9	P39005	GDT1	YBR187W	843 nt		2.93	□□□□□ -1.94
KRE9	P39005	SHG1	YBR258C	429 nt		2.93	□□□□□ -1.94
KRE9	P39005	UBP12	YJL197W	3765 nt		2.93	□□□□□ -1.94
KRE9	P39005	RRN7	YJL025W	1545 nt		2.93	□□□□□ -1.94
KRE9	P39005	ULP1	YPL020C	1866 nt		2.92	□□□□□ -1.94
KRE9	P39005	STP1	YDR463W	1560 nt		2.92	□□□□□ -1.94
KRE9	P39005	EPO1	YMR124W	2832 nt		2.92	□□□□□ -1.94
KRE9	P39005	FAD1	YDL045C	921 nt		2.92	□□□□□ -1.94
KRE9	P39005	MFA1	YDR461W	111 nt		2.92	□□□□□ -1.94
KRE9	P39005	TDA2	YER071C	381 nt		2.92	□□□□□ -1.94
KRE9	P39005	PUG1	YER185W	912 nt		2.92	□□□□□ -1.94
KRE9	P39005	FAR7	YFR008W	666 nt		2.92	□□□□□ -1.94
KRE9	P39005	YFR010W-A	YFR010W-A	189 nt		2.92	□□□□□ -1.94
KRE9	P39005	RPS4B	YHR203C	786 nt		2.92	□□□□□ -1.94
KRE9	P39005	SOP4	YJL192C	705 nt		2.92	□□□□□ -1.94
KRE9	P39005	RPS4A	YJR145C	786 nt		2.92	□□□□□ -1.94
KRE9	P39005	IMP1	YMR150C	573 nt		2.92	□□□□□ -1.94
KRE9	P39005	TOM22	YNL131W	459 nt		2.92	□□□□□ -1.94
KRE9	P39005	YER077C	YER077C	2067 nt		2.92	□□□□□ -1.94
KRE9	P39005	PFK1	YGR240C	2964 nt		2.92	□□□□□ -1.94
KRE9	P39005	NCR1	YPL006W	3513 nt		2.92	□□□□□ -1.94
KRE9	P39005	SEC2	YNL272C	2280 nt		2.91	□□□□□ -1.94
KRE9	P39005	SPT23	YKL020C	3249 nt		2.91	□□□□□ -1.94
KRE9	P39005	PSP1	YDR505C	2526 nt		2.91	□□□□□ -1.94
KRE9	P39005	SNU56	YDR240C	1479 nt		2.91	□□□□□ -1.94
KRE9	P39005	TCO89	YPL180W	2400 nt		2.91	□□□□□ -1.94
KRE9	P39005	MNT4	YNR059W	1743 nt		2.91	□□□□□ -1.94
KRE9	P39005	IMH1	YLR309C	2736 nt		2.91	□□□□□ -1.94
KRE9	P39005	HSP30	YCR021C	999 nt		2.91	□□□□□ -1.94
KRE9	P39005	snR68	snR68	136 nt		2.91	□□□□□ -1.94
KRE9	P39005	YDR340W	YDR340W	303 nt		2.91	□□□□□ -1.94
KRE9	P39005	SPO73	YER046W	432 nt		2.91	□□□□□ -1.94
KRE9	P39005	YHI9	YHR029C	885 nt		2.91	□□□□□ -1.94
KRE9	P39005	YKL069W	YKL069W	543 nt		2.91	□□□□□ -1.94
KRE9	P39005	YLR171W	YLR171W	390 nt		2.91	□□□□□ -1.94
KRE9	P39005	YML116W-A	YML116W-A	303 nt		2.91	□□□□□ -1.94
KRE9	P39005	ASC1	YMR116C	960 nt		2.91	□□□□□ -1.94
KRE9	P39005	YMR173W-A	YMR173W-A	1185 nt		2.91	□□□□□ -1.94
KRE9	P39005	YNL150W	YNL150W	408 nt		2.91	□□□□□ -1.94
KRE9	P39005	PHO88	YBR106W	567 nt		2.91	□□□□□ -1.94
KRE9	P39005	CMD1	YBR109C	444 nt		2.91	□□□□□ -1.94
KRE9	P39005	SEC66	YBR171W	621 nt		2.91	□□□□□ -1.94
KRE9	P39005	DAP2	YHR028C	2457 nt		2.91	□□□□□ -1.94
KRE9	P39005	SYO1	YDL063C	1863 nt		2.9	□□□□□ -1.94
KRE9	P39005	SWH1	YAR042W	3567 nt		2.9	□□□□□ -1.94
KRE9	P39005	RDH54	YBR073W	2877 nt		2.9	□□□□□ -1.95
KRE9	P39005	NDC80	YIL144W	2076 nt		2.9	□□□□□ -1.95
KRE9	P39005	YDL032W	YDL032W	312 nt		2.9	□□□□□ -1.95
KRE9	P39005	RRP42	YDL111C	798 nt		2.9	□□□□□ -1.95
KRE9	P39005	HLR1	YDR528W	1272 nt		2.9	□□□□□ -1.95
KRE9	P39005	NTF2	YER009W	378 nt		2.9	□□□□□ -1.95

Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms