Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE6BP35913 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE6BP35913 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDE6BP35913 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE6BP35913 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDE6BP35913 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.23■■□□□ 1.79
PDE6BP35913 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.23■■□□□ 1.79
PDE6BP35913 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.23■■□□□ 1.79
PDE6BP35913 AC060766.5-201ENST00000590539 871 ntBASIC26.23■■□□□ 1.79
PDE6BP35913 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
PDE6BP35913 AC137767.1-201ENST00000602918 1920 ntBASIC26.23■■□□□ 1.79
PDE6BP35913 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE6BP35913 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.22■■□□□ 1.79
PDE6BP35913 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.22■■□□□ 1.79
PDE6BP35913 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.22■■□□□ 1.79
PDE6BP35913 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
PDE6BP35913 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
PDE6BP35913 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.22■■□□□ 1.79
PDE6BP35913 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.22■■□□□ 1.79
PDE6BP35913 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.22■■□□□ 1.79
PDE6BP35913 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.22■■□□□ 1.79
PDE6BP35913 HLA-B-256ENST00000639848 1089 ntBASIC26.22■■□□□ 1.79
PDE6BP35913 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE6BP35913 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE6BP35913 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.22■■□□□ 1.79
PDE6BP35913 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDE6BP35913 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE6BP35913 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE6BP35913 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PDE6BP35913 MIR718-201ENST00000390190 70 ntBASIC26.21■■□□□ 1.79
PDE6BP35913 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PDE6BP35913 AL355472.2-201ENST00000422958 438 ntBASIC26.21■■□□□ 1.79
PDE6BP35913 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
PDE6BP35913 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.21■■□□□ 1.79
PDE6BP35913 FAM21FP-204ENST00000608637 956 ntBASIC26.21■■□□□ 1.79
PDE6BP35913 AC100791.3-201ENST00000617619 330 ntBASIC26.21■■□□□ 1.79
PDE6BP35913 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDE6BP35913 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.21■■□□□ 1.79
PDE6BP35913 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PDE6BP35913 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PDE6BP35913 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDE6BP35913 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.2■■□□□ 1.78
PDE6BP35913 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.2■■□□□ 1.78
PDE6BP35913 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PDE6BP35913 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PDE6BP35913 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.2■■□□□ 1.78
PDE6BP35913 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
PDE6BP35913 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PDE6BP35913 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
PDE6BP35913 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
PDE6BP35913 CYP2T3P-201ENST00000601990 817 ntBASIC26.19■■□□□ 1.78
PDE6BP35913 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDE6BP35913 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDE6BP35913 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.18■■□□□ 1.78
PDE6BP35913 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.18■■□□□ 1.78
PDE6BP35913 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PDE6BP35913 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.18■■□□□ 1.78
PDE6BP35913 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PDE6BP35913 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDE6BP35913 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PDE6BP35913 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.18■■□□□ 1.78
PDE6BP35913 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
PDE6BP35913 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.18■■□□□ 1.78
PDE6BP35913 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.18■■□□□ 1.78
PDE6BP35913 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.17■■□□□ 1.78
PDE6BP35913 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDE6BP35913 RPPH1-201ENST00000516869 333 ntBASIC26.17■■□□□ 1.78
PDE6BP35913 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.17■■□□□ 1.78
PDE6BP35913 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.17■■□□□ 1.78
PDE6BP35913 FAM197Y4-202ENST00000622692 608 ntBASIC26.17■■□□□ 1.78
PDE6BP35913 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.17■■□□□ 1.78
PDE6BP35913 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDE6BP35913 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDE6BP35913 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE6BP35913 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.16■■□□□ 1.78
PDE6BP35913 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE6BP35913 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.16■■□□□ 1.78
PDE6BP35913 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDE6BP35913 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.16■■□□□ 1.78
PDE6BP35913 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE6BP35913 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDE6BP35913 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE6BP35913 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.15■■□□□ 1.78
PDE6BP35913 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDE6BP35913 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.15■■□□□ 1.78
PDE6BP35913 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PDE6BP35913 AC091799.1-201ENST00000422823 811 ntBASIC26.15■■□□□ 1.78
PDE6BP35913 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE6BP35913 MIR4497-201ENST00000583208 89 ntBASIC26.15■■□□□ 1.78
PDE6BP35913 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.15■■□□□ 1.78
PDE6BP35913 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE6BP35913 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE6BP35913 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms