Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.49■□□□□ 0.07
CKS2P33552 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CKS2P33552 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CKS2P33552 C17orf82-201ENST00000623772 1530 ntBASIC15.48■□□□□ 0.07
CKS2P33552 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CKS2P33552 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.48■□□□□ 0.07
CKS2P33552 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.48■□□□□ 0.07
CKS2P33552 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 AC129492.7-201ENST00000622992 756 ntBASIC15.48■□□□□ 0.07
CKS2P33552 AL049796.1-201ENST00000565336 1766 ntBASIC15.48■□□□□ 0.07
CKS2P33552 AC026471.6-201ENST00000622954 1905 ntBASIC15.48■□□□□ 0.07
CKS2P33552 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 GABARAPL3-202ENST00000624044 1851 ntBASIC15.48■□□□□ 0.07
CKS2P33552 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKS2P33552 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
CKS2P33552 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 AC005703.6-201ENST00000623265 1329 ntBASIC15.47■□□□□ 0.07
CKS2P33552 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.47■□□□□ 0.07
CKS2P33552 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CKS2P33552 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.47■□□□□ 0.07
CKS2P33552 SNX5-217ENST00000606557 1087 ntBASIC15.47■□□□□ 0.07
CKS2P33552 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CKS2P33552 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKS2P33552 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 AL391422.3-201ENST00000603791 2761 ntBASIC15.47■□□□□ 0.07
CKS2P33552 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.47■□□□□ 0.07
CKS2P33552 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.46■□□□□ 0.07
CKS2P33552 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.46■□□□□ 0.07
CKS2P33552 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.46■□□□□ 0.07
CKS2P33552 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.46■□□□□ 0.07
CKS2P33552 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.46■□□□□ 0.07
CKS2P33552 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.46■□□□□ 0.07
CKS2P33552 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.46■□□□□ 0.07
CKS2P33552 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS2P33552 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.46■□□□□ 0.07
CKS2P33552 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CKS2P33552 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.45■□□□□ 0.06
CKS2P33552 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CKS2P33552 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.45■□□□□ 0.06
CKS2P33552 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.45■□□□□ 0.06
CKS2P33552 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CKS2P33552 PCDHAC2-203ENST00000615316 3011 ntBASIC15.45■□□□□ 0.06
CKS2P33552 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
CKS2P33552 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.45■□□□□ 0.06
CKS2P33552 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS2P33552 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.44■□□□□ 0.06
CKS2P33552 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.44■□□□□ 0.06
CKS2P33552 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CKS2P33552 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms