Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 AC073912.3-201ENST00000624414 853 ntBASIC20.81■□□□□ 0.92
LAMA1P25391 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LAMA1P25391 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 AC026471.6-201ENST00000622954 1905 ntBASIC20.81■□□□□ 0.92
LAMA1P25391 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LAMA1P25391 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.81■□□□□ 0.92
LAMA1P25391 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LAMA1P25391 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.81■□□□□ 0.92
LAMA1P25391 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 AC087742.1-201ENST00000575880 1738 ntBASIC20.81■□□□□ 0.92
LAMA1P25391 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.81■□□□□ 0.92
LAMA1P25391 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.81■□□□□ 0.92
LAMA1P25391 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.81■□□□□ 0.92
LAMA1P25391 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LAMA1P25391 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMA1P25391 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMA1P25391 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMA1P25391 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.8■□□□□ 0.92
LAMA1P25391 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
LAMA1P25391 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LAMA1P25391 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMA1P25391 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.8■□□□□ 0.92
LAMA1P25391 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.8■□□□□ 0.92
LAMA1P25391 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LAMA1P25391 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.8■□□□□ 0.92
LAMA1P25391 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.8■□□□□ 0.92
LAMA1P25391 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.8■□□□□ 0.92
LAMA1P25391 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LAMA1P25391 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.79■□□□□ 0.92
LAMA1P25391 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.79■□□□□ 0.92
LAMA1P25391 AC233263.1-201ENST00000578059 224 ntBASIC20.79■□□□□ 0.92
LAMA1P25391 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
LAMA1P25391 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
LAMA1P25391 KRT17P1-201ENST00000399211 1546 ntBASIC20.79■□□□□ 0.92
LAMA1P25391 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.79■□□□□ 0.92
LAMA1P25391 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LAMA1P25391 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.79■□□□□ 0.92
LAMA1P25391 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LAMA1P25391 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.79■□□□□ 0.92
LAMA1P25391 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LAMA1P25391 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
LAMA1P25391 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.78■□□□□ 0.92
LAMA1P25391 Z99916.2-201ENST00000604037 246 ntBASIC20.78■□□□□ 0.92
LAMA1P25391 LINC01023-201ENST00000606054 436 ntBASIC20.78■□□□□ 0.92
LAMA1P25391 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.78■□□□□ 0.92
LAMA1P25391 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMA1P25391 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LAMA1P25391 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LAMA1P25391 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.77■□□□□ 0.92
LAMA1P25391 FAM210CP-201ENST00000445714 574 ntBASIC20.77■□□□□ 0.92
LAMA1P25391 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LAMA1P25391 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.77■□□□□ 0.92
LAMA1P25391 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.77■□□□□ 0.92
LAMA1P25391 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LAMA1P25391 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LAMA1P25391 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LAMA1P25391 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LAMA1P25391 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.77■□□□□ 0.92
LAMA1P25391 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.77■□□□□ 0.92
LAMA1P25391 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.77■□□□□ 0.92
LAMA1P25391 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.77■□□□□ 0.92
LAMA1P25391 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LAMA1P25391 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LAMA1P25391 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.76■□□□□ 0.91
LAMA1P25391 AL591742.1-201ENST00000604433 565 ntBASIC20.76■□□□□ 0.91
LAMA1P25391 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMA1P25391 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LAMA1P25391 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LAMA1P25391 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.76■□□□□ 0.91
LAMA1P25391 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
LAMA1P25391 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMA1P25391 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.76■□□□□ 0.91
LAMA1P25391 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.76■□□□□ 0.91
LAMA1P25391 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMA1P25391 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LAMA1P25391 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMA1P25391 AL445228.2-201ENST00000605589 952 ntBASIC20.76■□□□□ 0.91
LAMA1P25391 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LAMA1P25391 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMA1P25391 UBE2SP1-201ENST00000450587 669 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms