Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.66■□□□□ 0.74
CHMP24386 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP24386 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.66■□□□□ 0.74
CHMP24386 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHMP24386 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CHMP24386 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.65■□□□□ 0.74
CHMP24386 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.65■□□□□ 0.74
CHMP24386 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP24386 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP24386 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.65■□□□□ 0.74
CHMP24386 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHMP24386 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP24386 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP24386 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP24386 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
CHMP24386 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CHMP24386 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CHMP24386 AC123595.1-201ENST00000440769 1046 ntBASIC19.64■□□□□ 0.73
CHMP24386 YBX1P1-201ENST00000445822 960 ntBASIC19.64■□□□□ 0.73
CHMP24386 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.64■□□□□ 0.73
CHMP24386 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP24386 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP24386 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP24386 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP24386 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHMP24386 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.64■□□□□ 0.73
CHMP24386 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP24386 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP24386 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHMP24386 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP24386 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CHMP24386 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP24386 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP24386 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP24386 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.63■□□□□ 0.73
CHMP24386 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP24386 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CHMP24386 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP24386 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP24386 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CHMP24386 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CHMP24386 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.62■□□□□ 0.73
CHMP24386 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP24386 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP24386 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CHMP24386 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP24386 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.62■□□□□ 0.73
CHMP24386 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHMP24386 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP24386 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP24386 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP24386 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 AL157384.1-201ENST00000445995 2473 ntBASIC19.61■□□□□ 0.73
CHMP24386 AC026471.6-201ENST00000622954 1905 ntBASIC19.61■□□□□ 0.73
CHMP24386 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP24386 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP24386 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP24386 MIR6084-201ENST00000622012 110 ntBASIC19.61■□□□□ 0.73
CHMP24386 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP24386 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP24386 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP24386 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHMP24386 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.6■□□□□ 0.73
CHMP24386 SMUG1P1-201ENST00000590640 811 ntBASIC19.6■□□□□ 0.73
CHMP24386 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP24386 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHMP24386 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
CHMP24386 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP24386 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms