Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-HP0C2I4 YBR113WYBR113W 483 nt5.44□□□□□ -1.54
TY1A-HP0C2I4 snR49snR49 165 nt5.44□□□□□ -1.54
TY1A-HP0C2I4 URC2YDR520C 2319 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 MNT4YNR059W 1743 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 CTM1YHR109W 1758 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 YDR169C-AYDR169C-A 150 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 YDR262WYDR262W 819 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 CAJ1YER048C 1176 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 YGL041CYGL041C 204 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 YHR193C-AYHR193C-A 375 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 RRD2YPL152W 1077 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 PIN3YPR154W 648 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 SHS1YDL225W 1656 nt5.43□□□□□ -1.54
TY1A-HP0C2I4 MON1YGL124C 1935 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 SLK19YOR195W 2466 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 YCL065WYCL065W 369 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 RPP1AYDL081C 321 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 RPC11YDR045C 333 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 YDR344CYDR344C 444 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)BtG(GCC)B 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 SUF16tG(GCC)C 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)D1tG(GCC)D1 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)D2tG(GCC)D2 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)EtG(GCC)E 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 SUF20tG(GCC)F1 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)F2tG(GCC)F2 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)G1tG(GCC)G1 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)G2tG(GCC)G2 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)J1tG(GCC)J1 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 SUF23tG(GCC)J2 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)MtG(GCC)M 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)O1tG(GCC)O1 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 SUF17tG(GCC)O2 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)P1tG(GCC)P1 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 tG(GCC)P2tG(GCC)P2 71 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 YGL149WYGL149W 306 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 SDH2YLL041C 801 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 YMR194C-AYMR194C-A 225 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 PEX17YNL214W 600 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 IES4YOR189W 351 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 MCP1YOR228C 909 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 UBC11YOR339C 471 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 DAD3YBR233W-A 285 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 QNS1YHR074W 2145 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 POL12YBL035C 2118 nt5.42□□□□□ -1.54
TY1A-HP0C2I4 RAD52YML032C 1416 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YND1YER005W 1893 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YOR022CYOR022C 2148 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 SAC6YDR129C 1929 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 TRF5YNL299W 1929 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YDL177CYDL177C 513 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YDL228CYDL228C 642 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 OTU1YFL044C 906 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YFL064CYFL064C 525 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YPS5YGL259W 498 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 PHB1YGR132C 864 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 FMC1YIL098C 468 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 PGA1YNL158W 597 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 IDH2YOR136W 1110 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YOR385WYOR385W 873 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 MKT1YNL085W 2493 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 CST6YIL036W 1764 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 VPS5YOR069W 2028 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 YBP1YBR216C 2025 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 IMD3YLR432W 1572 nt5.41□□□□□ -1.54
TY1A-HP0C2I4 UBA2YDR390C 1911 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 SKN1YGR143W 2316 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 YDL185C-AYDL185C-A 228 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 GPI8YDR331W 1236 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 TRX2YGR209C 315 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 PNP1YLR209C 936 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 YOL155W-AYOL155W-A 135 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 GDT1YBR187W 843 nt5.4□□□□□ -1.54
TY1A-HP0C2I4 TPD3YAL016W 1908 nt5.4□□□□□ -1.55
TY1A-HP0C2I4 MNN1YER001W 2289 nt5.4□□□□□ -1.55
TY1A-HP0C2I4 RNH70YGR276C 1662 nt5.4□□□□□ -1.55
TY1A-HP0C2I4 NIC96YFR002W 2520 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 OPI6YDL096C 327 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 GRX4YER174C 735 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 YHL026CYHL026C 948 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 YAL056C-AYAL056C-A 351 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 YKE2YLR200W 345 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 IST1YNL265C 897 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 MRPS12YNR036C 462 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 SPE3YPR069C 882 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 DPM1YPR183W 804 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 YFL042CYFL042C 2025 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 NDC80YIL144W 2076 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 MRC1YCL061C 3291 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 ATG21YPL100W 1491 nt5.39□□□□□ -1.55
TY1A-HP0C2I4 DBF2YGR092W 1719 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 MDM36YPR083W 1740 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 NOP6YDL213C 678 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 SUR2YDR297W 1050 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 BIO2YGR286C 1128 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 TAF9YMR236W 474 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 HUB1YNR032C-A 222 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 INO4YOL108C 456 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 VPS52YDR484W 1926 nt5.38□□□□□ -1.55
TY1A-HP0C2I4 TRP5YGL026C 2124 nt5.38□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms